Home |  Text search
[R] (-) COG3413 Predicted DNA binding protein
4 genomes BUD1910 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1207

rrnAC1786

HVO_A0563

Hbo1632

Hbo2710

- - - - -

Pairwise sequence scores
Consensus score1590 Hbo1632 HVO_A0563 VNG1207 rrnAC1786 Hbo2710
942Hbo1632 1620 688 605 785 718
1054HVO_A0563 688 1621 572 750 809
863VNG1207 605 572 1552 726 646
1133rrnAC1786 785 750 726 1601 834
1136Hbo2710 718 809 646 834 1694

225 symbols
consensus       MYEATLRIADDG-AYAAATAGTAARIELWCNDHCDLLHVRGGDGEAVLDRVEATVGVAER
#oth            121.2112322212.22..22221131...12.1.1.222.33224.2231342..1232
Hbo1632         :HQ:V:::NSNT:P:ER::::SD::::::::N:::::S:D:RV::E:F:HI:E::::YNE
HVO_A0563       ::::S:::R::S:::::::::N::SV:::::E:::M:::S:EA:SD:::::RD:::::AS
VNG1207         :QQ::::L:GS:S:::::::N:D::MQ::::::::::E:S::GVAR::AA:D:R::IRD:
rrnAC1786       ::::VF:V:G:::::E:::D::GT::::::T::S::::L::::V:P:VEQ:CG:::::::
Hbo2710         V::::FE:T::::G:TL::EE:::SL::::::::::::I::P:A:::V::::HL:::R::

consensus       LERGDERVLVTDACLRAHDADAIEAYLAANGCLLVPPLRYEGGAKVCRVLALSADALTAV
#oth            1333224131.21..13143241.41134221..1..11.33.2.3212.122232.123
Hbo1632         :RGEHG::I::::::K::SKHN::P::ES:N::::::I:::::::RV::::SR:ED::NF
HVO_A0563       V:::::L:V::AD:::D:EI:H::G:VRKH:L::::::::R:::::::L::V:::D:::C
VNG1207         VTE::TT:A::E:::::AT::GV:DT:::H::::::::T:DD:Q:HLQ:::::PA:::D:
rrnAC1786       ::TN:GQ::::E:::KV:I::TV:R:::DE::::::::::AE:H:LV:A:G::S:::S::
Hbo2710         :D:PE:VL:I::D:::R::TN::::::VR:D:::L::::::R::::::::::DSGS::DL

consensus       YRELVADGE-VTVESKREVSAVSADAPLVSPGDLLPDLSPRQREVLRLAHEAGYYEIPRG
#oth            123133223213.21..213323422.2233333313.12..222132.124...12..1
Hbo1632         :A:ITETY:::H::::::IT::F::Q:V::LQA:::T:::::::IFT::::R:::::::E
HVO_A0563       F:D::DS:FD:S:::::A::FA:GSG::LA:A:AM:A:TG::::A:::::AG:::DL:::
VNG1207         :HA:R::Y::I::AD::::::PASA::----:TQAA::TA::AA:::A:VD:::::R::E
rrnAC1786       ::S:AS:FD::::::::::GS:TP:::::TV::VV:S::::::::FLT:::E::::L:::
Hbo2710         ::::::::TF:D:L:::H:NV::E::::-::SS:::::::::YD::Q::V:D::::::::

consensus       TTTAAIADRVGVQRRTAEEHLRRAERKLADAVVEYL---------
#oth            11.221.113112.1.1.2....1.4.121132332211111111
Hbo1632         :::TEL:EE::I::::L:H::::T:E:::::F::L::::::::::
HVO_A0563       IE::T:::EM::S::::::::::::::VM:S:AQ:VL::::::::
VNG1207         :::::L:::FDIA:S:L::::::::G:::R:A:RD-:::::::::
rrnAC1786       ::::::::::::::::::D::::::K:::::L:A:::::::::::
Hbo2710         :::E:::::L::S::::::::::::N::I:::F:H:RGRGRGQSQ