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4 genomes BUD1934 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0341

rrnAC3191

HVO_1501

Hbo0052

Hmu1201

- - - -

Pairwise sequence scores
Consensus score1827 rrnAC3191 HVO_1501 Hbo0052 rrnAC0341 Hmu1201
1011rrnAC3191 1852 897 872 754 691
1520HVO_1501 897 1838 1450 1099 1028
1465Hbo0052 872 1450 1859 1092 986
1322rrnAC0341 754 1099 1092 1839 1221
1255Hmu1201 691 1028 986 1221 1837

258 symbols
consensus       MLPAERKRRIVELVSERDGRSVEELADELGFSKATIRRDLRELEDRGLIERSHGGAVPAS
#oth            .1.1..112..21.232.121.23.231122.1.......22.122.1...1....1.11
rrnAC3191       :I:D::RKE::RQ:NRS:RVT::::TE:F:V:E:::::::SS:AED:::::F::::L:::
HVO_1501        :::::::::::::::DS::::::S:S:H::Y:::::::::::::::::::::::::::VT
Hbo0052         :::::::::::::::AD::::::G::::::Y:::::::::::::::::::::::::::VT
rrnAC0341       ::::::::T::Q::T::::C::S:::A::E:::::::::::D::SQ:R::::::::::::
Hmu1201         ::::::::::::::T::::C::AR::T::D::::::::::Q::::D:R::::::::::::

consensus       SVGKERPYGQREVDNLDGKRAIAERAVDELADGQVVFFDAGTTTMEVARAIPEDGSVLAV
#oth            211312211121112332.11..3..121242111.2..1.2.1111.123.42333221
rrnAC3191       E--:DGSSTADSI::PS::::::K::::::S::DA::::T:P:AR:I:K::::QL:L::A
HVO_1501        :::R:QT:::K::Q::E::::::D:::E:::E:::::::::::::::::KV:K::TI:G:
Hbo0052         T::::QT:::K::Q:I::::S::::::E:ITP::::::::::::::::KQA:T:::::S:
rrnAC0341       :::T::::::::::HYAE:Q::::::AQ:VRE::::C::::S::::::::::-:TDYV:A
Hmu1201         :::Q::::::::::R::A:Q:::A::::L:Q:A:::S::::::::A::::L:SEAG:E::

consensus       TNSPRLATELAEEDNEVKLTGGTLRRRTRALVGPTAESFLERTNFDLLFLGTNAIDADAG
#oth            ..1.21.31.4233311111.11..3112.....1.112222211.11.11.1121332.
rrnAC3191       ::::ES:F::R:TCG:::VV:DS::QTSD:::::S:::Y:RK::::IV::E:D:VQI:G:
HVO_1501        :::::::I::N:::::::::::::::::K::::::::::M::::::::::::::L:VES:
Hbo0052         :::::::V::GK:E:D:::::::::S:::::::::::::M::::::::::::::::::G:
rrnAC0341       ::M:D:::::::G:VDT:::::S::P:::::::::::RAV::M:::::::::::L:SA::
Hmu1201         ::M:D:::T:LDKGI::TV:::::::::::::::::QR::DDHHV::::V:::S:::T::

consensus       LTTPNEDEARIKELMVEKAARVVLVADASKLGRRSFVQFAALDDVDLFVTDASLDGALRA
#oth            .111..1..12.2122.3122.1....31.2141..141.31221.311..321233312
rrnAC3191       :SVS::::::::T:LC:GGRH:I::::G:::DSQ::RE::TVE:I:M:I::V::SDEM::
HVO_1501        ::::::::::M:::::::::K::::::L::::::::::::S:EEI:::I::GT::ADS:E
Hbo0052         ::::::::::M::::T::::::::::::T:V:K::::K::D:G:::V:::::E:PQRE:Q
rrnAC0341       :S:::::::A:::::::R:R::::::::::F:D::::S:::::E:::L:::::PP:::A:
Hmu1201         ::::::A::AV:SRF::Q:S:::::::S::FDEQ:::TV::::A::TL:::RTP::::A:

consensus       ALENADVAVVD---AVA-
#oth            222412.2.321112322
rrnAC3191       VF:Q:N:::I:NLL::P:
HVO_1501        EI:S:G:T::::::G::R
Hbo0052         :F::EG:S::A::::PPE
rrnAC0341       ::AD:::::EE:::VST:
Hmu1201         ::DE:::T:LE::::D::