4 genomes BUD1941 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - pNG7336 HVO_A0287 Hbo3640 Hmu2924 - - - -

Pairwise sequence scores
Consensus score	2997	Hbo3640	Hmu2924	pNG7336	HVO_A0287
2368	Hbo3640	3030	2171	2108	2152
2606	Hmu2924	2171	2961	2357	2333
2672	pNG7336	2108	2357	2996	2565
2685	HVO_A0287	2152	2333	2565	2992

394 symbols
consensus       MEITDVTAVTVDVPLVDLDEHLGIAPYVTNHGRLESMERVLVRVDTDEGISGWGEMRVFL
#oth            .1..112.21.11..2221121..1..1...13121.1...........12....1.1..
Hbo3640         :K:::IE:FA:NI:::PFEDG-:::::::::NS:TD:D:::::::::::::::::V::::
Hmu2924         ::::::::T:::::::::::R:::G::::::::V::::::::::::::::A::::::T::
pNG7336         ::::G:S::::::::A::::::::G:::::::K:R::::::::::::::L::::::::::
HVO_A0287       :::::::::::::::TST:::::::::T::::E:::::::::::::::::E:::::::::

consensus       SPAATESIIEDGIGPLIEGQSPFEIERLRRQVFVEYTNVDMFFAAVETACWDIVGKALDR
#oth            1.2..1.1....11.111......2.1......1..1.211..11..1.....1.11..1
Hbo3640         T::::V:::::::R::VV::::::L:A:::::::::A:A:::::P::V:::::::QS::K
Hmu2924         ::::::::::::::::::::::::V::::::::I::::IEL::::::::::::A:::::K
pNG7336         ::E:::::::::V::M::::::::::::::::::::::::::::::::::::::::::::
HVO_A0287       ::T::::L:::::::MVV:::::::::::::::::::::::::S::::::::::::::::

consensus       PVYELLGGWTAPTQTTAQHRAHVG-----DDAANDREVEVAFCLGILSPEESRVKAREAL
#oth            ..1.....1...2.21321132221111121332132111.1.....1..1..11.2.11
Hbo3640         ::::::::::::S::NTR::E:Q:DYSNE::YG::H:I:::Y::::::::Q::QR:A:V:
Hmu2924         ::F:::::A:::Y::::MNA:AG::::::A:::D::A::F::::::::::::::::Q:::
pNG7336         ::::::::::::::G:Q:::QS:D:::::G:STAPI::P::::::::::::::::::::H
HVO_A0287       ::::::::::::::S:L:::S::A::::::GTR:PGP:P::::::::P::::::::::::

consensus       DAGFSVLKTKAGRDWRQDVARIRAMHDEVDGQLEFRLDPNQGWTLDQAVRVGAMLEDAGI
#oth            21.12..........21..1..3.....1..1.1.........11...1...12.112..
Hbo3640         NE:Y:::::::::::TE:::::E::::::::E:S::::::::::I:::I:::SK:A::::
Hmu2924         :::::::::::::::Q::::::Q::::::::::::::::::::S:::::::::A::ES::
pNG7336         E:::T::::::::::::::E::::::::::::::::::::::::::::::::::::::::
HVO_A0287       ::::D:::::::::::::::::K:::::T::::::::::::::::::::::::::::E::

consensus       YLQYMEQPIRVDAHDSLARLRQRLRQPIAPNEDTYIPHNLRSLVEAGAMDVAVIDLTPAG
#oth            1...1......11.2...2.1111....1......111.121..1...1..1.1......
Hbo3640         ::::::::::::::::::G:KRQT::::G::::::::::::R::A:::I::::L::::::
Hmu2924         F::::::::::N::::::T::::::::::::::::::N:::::::::::::::L::::::
pNG7336         ::::::::::::::R:::::::::::::::::::::S:::Q::::::::::G::::::::
HVO_A0287       ::::L:::::::S:V::::::::::::::::::::V:::IS::::::::::G::::::::

consensus       GISGIRQQAAILEDAGVPFTHHCAFDLGIRTAAILHAVHGIPGFSLPPDSTYYGWEDDVI
#oth            ..2.1..1...21...1.11.................12..........11..1..2.1.
Hbo3640         ::T:L::E:::AA:::I:AV::::::::::::::::::::::::::::::V:::::::::
Hmu2924         ::A:L::::::V:::::::::::::::::::::::::::::::::::::T::::::::::
pNG7336         :::::::::::::::::::::::::::::::::::::FT:::::::::::::::::A:I:
HVO_A0287       ::::::::::::::::::::::::::::::::::::::S::::::::::::::A::G:::

consensus       ADPFEVEDGCLPAPDGPGLGISIDRDAIEEYRIA
#oth            22..2.22.2121.221...121.2121.1..13
Hbo3640         ::::D:A::T:RV:QDS::::E::::R:::::::
Hmu2924         ::::T::E:RMTV::E:::::DV:L:TV::::VR
pNG7336         ER::::SN::::::::::::V:::MA:::::::T
HVO_A0287       SE::::::::::::L:::::::V::::V:A:::-