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4 genomes BUD1943 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1210

HVO_2571

Hbo2284

Hmu2997

- - - -

Pairwise sequence scores
Consensus score2515 Hmu2997 rrnAC1210 HVO_2571 Hbo2284
1242Hmu2997 2501 844 918 843
1510rrnAC1210 844 2502 1203 1091
1883HVO_2571 918 1203 2556 1455
1766Hbo2284 843 1091 1455 2577

370 symbols
consensus       --------MPRMRRART--LLRALVHEIRAERLTFMAGSIAYHAFVSLLPLLLLLLAAVA
#oth            1111111222.3312321121..212.1.1.11.........1..2.1..11.11.2313
Hmu2997         :::::::::S:Y:NVGR::F:::VYT:V::::I::::::::::::I::::F::V::LL:T
rrnAC1210       ::::::::-M:FS::::EEV:::::::::::::::::::::::::L:I::::::V:TF:Q
HVO_2571        :::::::MN:::T::L::::G::I:Y:V:T::::::::::::G::::::::F::V::::S
Hbo2284         MTVLSLSE:::VE:GVS::::::::::::T:K:::::::::::::::::::F:::::IA:

consensus       AFGNQTLRASVVAAIGAVLTPGASDDIQAELERATQDASLSALGVLVLLWGTLRIFRGLD
#oth            3121321232222322311122221323222131223111.32.222.1..2.1...1..
Hmu2997         E::DPETASRL:::::TYFS:NE:GLLTNVV:G:RSET:::I::::T::::A:K:::S::
rrnAC1210       RTE:V:::::I:GIME::::TQ::GI::QG:TE:--:::V:::::GF::::S::::::::
HVO_2571        :T:DSG::EG:I:V:QS::::::G:V:V::::SS::L::::VV:A:::V:::::::::::
Hbo2284         T:Q::::DD::RTLA:V:::E:TR::FF::AT::::STGV:LF:GA::::::::::::::

consensus       TAFSDIYESEASNTFGDQLADGIVVLVTLAVALLIGSLANSALPALGDGPLGWLVARGLL
#oth            ........1112..12.123.1111.1112222122223322123321.21212232222
Hmu2997         ::::::::TGDE::L::TF::A:::::A:V:G:::VG::STQ:-SF::::V:T:LSKVVA
rrnAC1210       ::::::::TG:::::L:::G::L:L:::V:::I:SA:ALG:V::ET:S:::-:T::S::V
HVO_2571        :::::::::::A:::A:::L::::::::VSL:VVA:A:IE::::::-::A:::V:Y::::
Hbo2284         ::::::::::::::::::IR:::L::L:::IV:V:::VV:D:VGTVSS:TVA::IG:LF:

consensus       -VAGLFLVFYPMYYIFPDTDVSLLEVVPGTLVAAVGLTVFESLFRLYTAFSSTSPNSSVV
#oth            1212.21211.11.1...11.131.1...122..2.1.2211..2211112222232211
Hmu2997         :::A:T:::L:VF:V::::::TVR::::::V:::G:W:AL:::::Y:V::TG::ETFG::
rrnAC1210       RA::::V:::::::::::::::P::A:::VAF::I::::AQV::---:::K:G:TGGNII
HVO_2571        :::V::VT::::::::::EN:TS:::::::::::::::T::::::::VE:::RT:E::::
Hbo2284         :IL::S:AL:::::V::::::::::::::::T::::::::::::Q::::V:N:A::::::

consensus       AGILVLLTWLYFSGLVILLGAAVNAVLSNRSRDVNVRPVFGGHPQDA--RTDTVSREELA
#oth            12..1111...12...1.11..2....11..2..223122.2323332112221213123
Hmu2997         GT::LIV:::::N:::L:VA::T::::AG::E::AAIG-W:------::EEEL:ETV:F:
rrnAC1210       :S:::::S:::II:::::::::I::::::::A::DID::V:E:S:QNTI::T:M:::A:L
HVO_2571        ::::::::::::::::::::::::::::::::::::::L:::V:L:S:::::::T:G:VT
Hbo2284         ::::::::::::::::::::::::::::::::::::E:::::I:PE:K::H:G:::T::V

consensus       AALERLDRALAAA--ENVTVRVGDESVTIPRPDR-----VVIDRESLRFGPEAAVRLELR
#oth            132.21233232112132113222122211311211111223.122221122331212..
Hmu2997         EP::EICG::D:G:::P:::QT:ET:::L:PA:ERDCSVEQ:::PD:LG:D::RG::V::
rrnAC1210       :E::T:ADRFQQG:QGTI::EIA::RTD:DC:ET:::::ATV::S:DV::LDQS:A:T::
HVO_2571        ::I:::::LV:::PD:DL:L::::::::L:::E::::::::T:T:TS::L::DP::::::
Hbo2284         :TV::::KT:YD::::::V:T:DG:EIP::S::::::::::S:T:::::L:GG::SV:::

consensus       W--WPREK--
#oth            .112132211
Hmu2997         :::-EG:R::
rrnAC1210       :::::N::::
HVO_2571        :SS::DSHEE
Hbo2284         :::S::D:::