Home |  Text search
4 genomes BUD1945 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0091

HVO_2731

Hbo2465

Hmu1247

- - - -

Pairwise sequence scores
Consensus score4309 HVO_2731 Hbo2465 rrnAC0091 Hmu1247
3448HVO_2731 4430 3347 2760 2665
3556Hbo2465 3347 4392 2798 2752
3453rrnAC0091 2760 2798 4242 3257
3355Hmu1247 2665 2752 3257 4299

610 symbols
consensus       VPDIDPTEYEIAELGPAIKDIDDPDELEAILAAEADGENRAPAKALIEDRIEKFEEDDE-
#oth            1111..1211111...1...1..21.1211.31.32.11.21121.111.1..2221211
HVO_2731        :T:F::GD::VS:::::::::::LG:::E::Q::HR:Q:::::V::::S:::::S::E::
Hbo2465         :T:F:::K:D:S:::::::::::::::RE::D::K::::::G:I::::S::::::::G::
rrnAC0091       M:::::::H:::::::K:::V::A:::Q:M::L:E:::D:V:V:T::K:::::V:S::DG
Hmu1247         ::E:::::::::A:::K:::V:::::I::M:EL::A::::D:V:T:L:::L::LTAE:::

consensus       DIDPDEVDLSDLSVADVANALRDIDDADELRDLLEREQAGQDRDTAKRLIESRIDSVEGS
#oth            3212322..23112.1.1.2112111121.121..1.31.11.121112.22.11112.1
HVO_2731        PA:A:GL::ASM:T:E:G:::QSVEEVS::ES:::::E::EN::PV::::RN:::::K::
Hbo2465         -EEIG:I:::TM:A:E:G:::QN:::VE::ER:::E:SE:E:::SVS:::QR:L:A:Q::
rrnAC0091       E:::EA::::::T::::::MV::V::::V::::::::K:::::K:::SQ:::::E::::T
Hmu1247         ::::S::::TE:T::::::LV:::::::V:::V::::::::::K:::SR:::::E:I:::

consensus       EEEDGE--TEVDDRPPEERHPDLDHPTRDKRHVRGLVGGTYRDMWVYCETQAGELVDVSK
#oth            111121112122111...11.1.1...21.11.1212.11...........1.2.11.11
HVO_2731        D:::T:::V:::::T:::::::::::::::::::S:H:::::::::::::::::::::::
Hbo2465         :::EE-::::I::::::::::::S::::::::::A:R:::::::::::::::::::S:A:
rrnAC0091       ::AE::AV:::EYV::::KY:E:::::N::QW:E:T::AE:::::::::::::D::::::
Hmu1247         :D:::-::DGPAYV::::KY:E:::::SE::W:E:T:::::::::::::::Q:A:I:::R

consensus       EMLGKARELMDDYNA-------------DY--DED---ERVVAVLIGADVSDHADDVIAY
#oth            .......21.12..211111111111112.2222.111.1.....1.1212311111..2
HVO_2731        :::::::::::T::D:::::::::::::::::TT:::::::::::::::::K:VE:::::
Hbo2465         :::::::Q::::::::::::::::::::E:PDED:::::::::::V:D::KT:::::::L
rrnAC0091       ::::::::::N:::::::::::::::::A:::::::::::::::::::AA:::VE:::::
Hmu1247         :::::::RM::Q::GEATGETDEEAPTQ::GG:::GAP:E:::::::DG:GEL::EA::C

consensus       GADVVVYHEDERLARFRHQPYTEIFCDMARAGATH-DGEVDGGRDEEWRDYDEPRYTLFP
#oth            ...2..11..2..3..1.1.....111.1.1121122322322212211..11...11..
HVO_2731        ::::::VR::A::E::Q:K::::::::::::::::QNF::TD::::P:::::K:::V:::
Hbo2465         ::::::V:::::::::Q:K:::::VS:::::::::E::::I:::::::::::K:::V:::
rrnAC0091       :::L::::::D::D::::::::::::::::::G--::LAA::REET::K::H:::::V::
Hmu1247         :::R:::::::::G::::::::::::H:C:DS---:--------EFAF:::H::::::::

consensus       ATNNGRDLSALVQAELDSGLASDCSGLYIEEAMISNPAKTGAAGDKREFERVLHMKRPDF
#oth            ..1..........1.............1.2211....1.1.3..1111.1.1........
HVO_2731        :::::::::::::::::::::::::::::T:EV::::V:::V::E::::Q::::::::::
Hbo2465         :::::::::::::::::::::::::::F:D:EV::::V::::::E::T::::::::::::
rrnAC0091       :::::::::::::G::::::::::::::::S::::::::V:T::::K:::::::::::::
Hmu1247         ::H::::::::::G::::::::::::::::D::::::::::Q:::SK::::I::::::::

consensus       SGFEYSTILCIDNPHRDFHPQGASVIPGSFEVPDPDPEREGEVVDHEMELDDDWFRVAVT
#oth            ..........1.1.2.1.....1.......22.1..2..1.11.112221.12..2.2.1
HVO_2731        ::::::::::::::A:E:::::::::::::DL:E::A::::L::E:DAP::::::::T::
Hbo2465         ::::::::::L:::R:E::::::::::::::::::::::::LI::::L::::E:::::::
rrnAC0091       ::::::::::::K::::::::::::::::::M::::Y::D:::::YG:DI:::::T:E:E
Hmu1247         ::::::::::::K:::::::::G:::::::A:::::::::::::E::::::ES::S::::

consensus       EYDRLDEGVDLSGHDVIVAVGRGIGDDPTRGIELALDLVDAFEDADVGLSRGIITGSYSF
#oth            21.1.12.1..1..1.1..1...1.....1.1.11.1.1.1.1..22.11..11.1.11.
HVO_2731        A:::::::I::T::E::::::::M:::::K::::::::::Q::::E::VT:::V:::FN:
Hbo2465         DH::::::::::::::V::::::::::::::M::::E:A:::::::::VT:::V::::::
rrnAC0091       :::::SG::::::::::::::::::::::::::Q::::::::D:::L:::::V::S::::
Hmu1247         :::Q::D::::T::::V::M::::::::::::::G:E::::::::AF:::::V::S::::

consensus       DGHVEQYTQEDRQIGESGQVVAPELYIAAGISGAIQHKVGMDESDTIVAVNTDPDARIRD
#oth            .1.....13.1.....1..1.1.21.1.......1.....1...1.21.1....1.1...
HVO_2731        ::::::::H:::::::T::::::K::::::::::V:::::::::::::::::::::::::
Hbo2465         :A::::::::E:::::T:::::::::V:::::::::::::::::E:V::I::::E:::::
rrnAC0091       :::::::VT:E::::::::E:E:DV:::::::::::::::C:::::LI::::::::D:::
Hmu1247         :::::::VG::::::::::::E::V:V:::::::::::::::::::::::::::E:D:::

consensus       FSDYFIEGDLFEVLPRLTEALESG-FELATAMD---------EASDDGGA--G------G
#oth            ....11.......1.1..1.112.21.2121231111111111222.1112212222221
HVO_2731        :::::::::::::M::::T::KE:R::A:V:S:GGRAASTPPAGTS::::SA:AAADDR:
Hbo2465         :::::::::::::::E::::VK::S::FG::AE:::::::::::AT::::QT:SDIETD:
rrnAC0091       ::::L:::::::::::::::V:T::-::GAM:-::::::::::::::---::-::::::-
Hmu1247         :::::V:::::::::::::::::::-::::::Q::::::::::V:::---::-::::::-

consensus       --R-------
#oth            2211111111
HVO_2731        ES::::::::
Hbo2465         DG:SDGSERR
rrnAC0091       ::-:::::::
Hmu1247         ::-:::::::