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4 genomes BUD1948 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2114

HVO_0405

Hbo1098

Hmu0340

- - - -

Pairwise sequence scores
Consensus score3760 HVO_0405 Hbo1098 Hmu0340 rrnAC2114
2740HVO_0405 5132 2252 1658 1623
2579Hbo1098 2252 3902 1590 1534
2330Hmu0340 1658 1590 3676 1695
2321rrnAC2114 1623 1534 1695 3673

687 symbols
consensus       MRRRDFLRTLAL-GASGLALSTAGRARGHPTATGDGPA-----D-----DPLGRVDIEGA
#oth            12..32..22112.111121221232321.23232.13222221211113.1.3222121
HVO_0405        VD::Q::::V--::::A::V:::AVVGSR:ATAHP::F:::::-:::::E::::I::D::
Hbo1098         :H::::::AG::L:::::S:::ST::DA::-----::Y:::::-:::::K:F:H::V:::
Hmu0340         ::::PL::::--::-:::::GS::L:S::::::S::TPPAETP:S::::Q:::T:S::NV
rrnAC2114       ::::TV::R:::A:-T:VG:A-::TT:::::P::::T:EPAAS:TPTGE::::VLEM:TV

consensus       KEAVVSPDGTTAYVAATDGYAVVDISTPTRPRLLARRRDLLADHENGPLRGIQDLKL---
#oth            2.2.211..21111.122.212..212.22221.112121121211..22123.222111
HVO_0405        ::::::A::E:VF::::S::::::::A:E:QE:::E:::P:S:R:D::F::LY:A:::::
Hbo1098         ::::::::::V::L:::T::VT::::::D::SV::EV:NPVDE:::::::::F:V::DVT
Hmu0340         R:M:LN::::V::::TV::F::::V:D::EM:V:::E:-:::::AD:::S::W::HC:::
rrnAC2114       Y:V:T::::H:::::TG::V:L::LV:::S::::S::T:::::S::::IQRV:::AV:::

consensus       DGDRLLVAGPANPIPGAVAGFLVVDVSDPADPERIAFHETDFPIHNCFAADGRAYLTAND
#oth            1111.111...11222222.2211....111.122122.22221...2321231.1.211
HVO_0405        :::T:::V:::::::::P::V:::::::::T::E::::::E:::::::::::::::::::
Hbo1098         :P:T:V:V:::::::SV:::A:::::::::::::VS:F::KY::::::VR:EH::::R::
Hmu0340         ::::::::::::GGRDS:R::GY::::::::::LL:E::V::YT:::VL:::VG:F:GGG
rrnAC2114       S:S:::A::::H:AD::-H::V:F::::RQ::S:::GL:L:TR::::HFDGRY:::::::

consensus       GDGNPLVVADIDSGDELGRWSLVDADDRWADVPFSMRPLHDVWVHDDRAYLAYWDAGTWC
#oth            21211.1.3.311131112..12.1112.211.322221...1.1212.11.1..1...3
HVO_0405        ::R:::::L::::::::::::V:::::::::::P:::SV:::::::RV:HV:L::::::L
Hbo1098         :EA:A:::I:LE::EAV:E:::T:V:EV:G:::SER::::::Y::E:T:::::::::::I
Hmu0340         L::S::::::PE::T::A:::V::V:::::EL::G:VN::::::::::::::::::::::
rrnAC2114       R:::::L:V:V:AEQ:V:D:::L::G:A:T:::T:LW:::::::QH:::::::::G:::V

consensus       LDVSDPADPTLLGAVRGRDPEELAAITNRGR--ERREPPGNDHFVATDEAGDLLGIGGES
#oth            1.1.1.22121113.222112112232322121.132....1.1.1111312...1.3..
HVO_0405        V:L::::S:WV::::SPG::::I::L:P:::NR:::T::::H:Y::::D::::::V:V::
Hbo1098         ::::E::::::::S:AAP::S::SGSSSES:G::ALV::::H:Y:::::S:T:::::K::
Hmu0340         ::::::GE:::VSR::::PLD::LDV:::R:::::T:::::::::TV::T:::::::T::
rrnAC2114       V:::::S:IS:VSK::::P::D::::EDP:T::::S:::::::::TVN:DAS:::V::::

consensus       WAQ----ADDDS-T-L-GGPSGIELWDVSDPAAPERRSTIDPPPSPDPTRGGVWTTAHNF
#oth            .13221132211212121..1.1211.11..1311211111..111..131.11......
HVO_0405        ::IEV::DR::GT:E:V:::::V:::::T:::N:::::::E::A:::::L::::::::::
Hbo1098         :::RIGGN:E::E:R:I::::::D:::::::::::H:::::::::::::FS:::::::::
Hmu0340         ::-:::::ASG::-:-:T::G::AFY::T:::E:T:LGA:::::T:::::::::::::::
rrnAC2114       :DL::::G:::::-:-:::::::::Y:I:::TDA:LL::L::::TS::SP::IL::::::

consensus       ELRDGRCYSAWYRGGVKRHDVSDPTDPEELFWWRDPERASFWTAQLAAPGA--GCFVAAS
#oth            113.2.1.21..2...21..11.1.2.12222..122221.....2.21212213.113.
HVO_0405        DF::D:L:TS:::::::::::::::::V::A::::::::::::::Y:Y:F:DE:V:::S:
Hbo1098         :FH:::L::::::::::::::::::N::Q:T:::M:DE:::::::::T:::ET:Y::GT:
Hmu0340         ::V:::::A:::Q:::TV:::T:A:::V:R:H:::AG:GK::::::::::-::EF:LG::
rrnAC2114       ::T:N:::::::N:::RV::LT:::A::LA:E:::T:TT::::::R::---:::::::G:

consensus       RGAGN--------AQPALYTFPDHAG-Q--PPDLRA------------PTPADGAAGNDQ
#oth            31233111112222312.11...1112122113222222222222211211122331233
HVO_0405        ::V:D:::::::::S:::::::::::D:RD::T:::EPTTEPLVNT:::::TPSPS::ET
Hbo1098         W:TP::::::::::PSR:::::::::Q:AS::::M:NTSNGSTTGSLVG:A:S:TN:SS:
Hmu0340         I::FGVNTAADSPLES::FA:::---:-::------::::::::::::QR:::::TTT:G
rrnAC2114       TN:SQ:::::GTEV::G::::::---:-::-:QI:T:::::::::::::::T:DE:::--

consensus       TASATDAEATSETADGPGFGVGAG-AAALGAAAWRAR-----------------------
#oth            23112232321313221.1.213112111.312.23111111111111111111111111
HVO_0405        A:::SET:SSTS:T:A::::L:V:::::::V:G:LV:VTSGATESDRRSRPRASTGTPHR
Hbo1098         :Q:G::H::DTT:::T::::MEI:::G:::I:S::LL:::::::::::::::::::::::
Hmu0340         :R:GRASTP::::--:A:A:::::LLGL:::G::-C::::::::::::::::::::::::
rrnAC2114       ---::::DG::LGVG:::::::SA:V::V:L:::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
HVO_0405        VVPASNLSRTTEIAFLSPAGASGEPFHSNPWGSKHRSMSDESESLKERVETWMVGQMPII
Hbo1098         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu0340         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2114       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ---------RRAD-E---------------------------------------------
#oth            111111111.12221111111111111111111111111111111111111111111111
HVO_0405        QMHGGNSVV:K::A:SGEVVVELGGACAGCGISNITAQNIQSDLIMTFDEITDVQVKVPS
Hbo1098         ::::::::::::RR::::::::::::::::::::::::::::::::::::::::::::::
Hmu0340         :::::::::::SE:-:::::::::::::::::::::::::::::::::::::::::::::
rrnAC2114       :::::::::::R::-:::::::::::::::::::::::::::::::::::::::::::::

consensus       ---------------------------
#oth            111111111111111111111111111
HVO_0405        SGDHGSSTVEGGRGGELQYGDEGPGHF
Hbo1098         :::::::::::::::::::::::::::
Hmu0340         :::::::::::::::::::::::::::
rrnAC2114       :::::::::::::::::::::::::::