4 genomes BUD1950 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0468 HVO_1035 Hbo0529 Hmu1139 - - - -

Pairwise sequence scores
Consensus score	1228	HVO_1035	Hbo0529	rrnAC0468	Hmu1139
870	HVO_1035	1216	800	462	468
896	Hbo0529	800	1224	438	510
738	rrnAC0468	462	438	1244	645
745	Hmu1139	468	510	645	1332

180 symbols
consensus       MAWVRSEYAGELAVLSTWLVALLPWN-VTLFAEISG--VSVLFVRFLFARIQFIFGASFA
#oth            .1..1..11121..12.1.22.1..1112133222.11111122..121231121.3223
HVO_1035        :V:::::HG:A:::V::::C:::::::::YTRNL::::::L:::::P::EV::SW:L:SR
Hbo0529         :V::::::::P:::VL:V:SV::::::::YS:S:::::G:::::::P::Q:RYA::VP::
rrnAC0468       ::::K::::::F:::A::::G:A::S::S::-::E::::T:VGL:::PF:F::::::TLP
Hmu1139         ::::K::::P:::::::::::::::SGAV:PI:VG:RQ:T:VII:::YF:L:Y:::I::G

consensus       EAERPFLWPLSAAAFQAGQTLALAYQVWVVAAAVLAAALLLSLAYYAREDAVEAG-PVDP
#oth            222.2112232131113221222.23211211122131122122..321111.122.1..
HVO_1035        V:M:---G::::LSL:S:::V:V:::A:::G:::::L:V:F::V::L:DER:::::::::
Hbo0529         ::V:L:-D:M::I:::::S:IQ:::E::A:G:::::V:::VAI:::F::::::S::::::
rrnAC0468       -G::::::AWQV::::ESEP::::GTLG:A:LVGFLFP:G:::Y:::A::R:::VL:M::
Hmu1139         :Q::::::VVE:P::N--:::TT:SW:::G::VLSL:P:A::V:::VD:::H::AM::::

consensus       VRLLGGLLGLVGVVLAAATYLLVTRGFPGVPLPVGVVIALVFAGLLLTVDRT--------
#oth            ..12.2..112..2111.12.121112.1112.2.22331.1111....1.111111111
HVO_1035        ::V::::::V::::::::::::::::I::I:::L::::S::L::V:::::::::::::::
Hbo0529         :::::S::::A:::::V::::::::::::::::::::FLF:::::::::E::::::::::
rrnAC0468       :::F:::::::::LTL::SG:FI:S-::::TV:I:ALV:::::Y:::::::A::::::::
Hmu1139         :::Q:A::A:L::G:::::L:FWD:-Q:-:TI:::TALT:::GY::::::::DDGGVGEE