4 genomes BUD1958 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0095 HVO_2733 Hbo2467 Hmu1245 - - - -

Pairwise sequence scores
Consensus score	985	Hbo2467	HVO_2733	rrnAC0095	Hmu1245
580	Hbo2467	1043	502	357	408
681	HVO_2733	502	1113	459	453
669	rrnAC0095	357	459	922	562
701	Hmu1245	408	453	562	943

149 symbols
consensus       ------------VADAAGAAER--ED-R---YADRIRVLAAEARAARESLDPDPPD-ADE
#oth            11111111111223223.32222211211111311212.122.232.2211111222111
Hbo2467         :::::::::::MTD::::ES::SD::S:HSA:YEQ::S:::D:::E:RRFEAPSDAT:E:
HVO_2733        MSRDVTQSESRP:::GR:::::HP::V::::FGE:A::::::::E::::FE:P:SSA::R
rrnAC0095       ::::::::::::---MS:Q---::--:-::::D::L:::SRR:EQT:::::::::::-E:
Hmu1245         :::::::::::::KA:M:D:TA::--:-::::::::ER::D::TV::AT::::::::-::

consensus       RALELLRDGVGPTVALYCEARTGGSQVRFSGAEFDRLHRAMNDWLAAYAACYGVALDPDY
#oth            ..1222.2.21.2121.1111..22321.122.111.21121...33..1....311212
Hbo2467         :::SYV:G::A:VTGI:V:GH:::EHT:::QT:L:L::::L::::SL::R:::::V:::A
HVO_2733        ::::CA::::::A:S::VS::::DR::S:T:E::EL:::::::::TM::R::::D::A:F
rrnAC0095       ::M::::::F:::::::::::::::W::::::::E::E:I:::::DC:::::::E:AGT:
Hmu1245         ::MA:::E:L:::::::::::::E:IA::TT::::::QG:VD::::::::::::TV::::

consensus       SVRAAAELLLRTHDARDVAQLLTDVPERR
#oth            1..3...2.13..12111.2...21.111
Hbo2467         T::T:::I::Q:::::A::R::::A:P::
HVO_2733        T::E:::V::::::VV:T:::::C:::::
rrnAC0095       :::::::::VD::N:::::V:::G:::Q-
Hmu1245         :::V:::::VE:::I:::::::::::::-