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[U] (VirB4) COG3451 Type IV secretory pathway, VirB4 components
4 genomes BUD1961 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG6144

pNG5087

pNG6105

rrnAC1061

HVO_C0035

- -

Hut2390

- - -

Pairwise sequence scores
Consensus score5167 HVO_C0035 pNG5087 VNG6144 rrnAC1061 pNG6105 Hut2390
1455HVO_C0035 7507 750 869 986 1039 1038
1861pNG5087 750 8271 1357 1285 1421 1361
2330VNG6144 869 1357 5609 1662 1804 1774
3708rrnAC1061 986 1285 1662 4881 3417 3442
4142pNG6105 1039 1421 1804 3417 5298 3940
4164Hut2390 1038 1361 1774 3442 3940 5046

1139 symbols
consensus       -----------------------------------MIRNLLPF-----------------
#oth            111111112222222222212222222222222332332232222222222222122122
HVO_C0035       MTQNTQHTIDAQIQKDPGQIVPPRVDTSIDITDHLSLKD:KTLAPAGVLTTAGVGGLFTG
pNG5087         ::::::::MADSEEEYNTNIIHESLGDTTNFWGDYTLGE:IL:LIPPFGFLVAMGMPFVP
VNG6144         :::::::::::::::::::::::::::::::::MPTM:::VLQ:::::::::::::::::
rrnAC1061       ::::::::::::::::::::::::::::::::::::TWDW::::::::::::::::::::
pNG6105         :::::::::::::::::::::::::::::::::::::G::::::::::::::::::::::
Hut2390         ::::::::::::::::::::::::::::::::::::::EK::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            222222222222212222212221222212222222222222222222222222222222
HVO_C0035       NPTLGTVGLGAGAVAGVGAIGMTVTNRWYNSPRERVADWYSHIRSDDENTALADVTGVAG
pNG5087         AALFFPTLALTAVVEVFLYILHKVRPDHYRLTEWLRVRLFWLVKKKQYTHGQGNQDTRQV
VNG6144         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1061       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
pNG6105         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut2390         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -------------------------PGNDALADDEEW-----------------------
#oth            222222111121221122112121222342434344422222112222222222222222
HVO_C0035       MTDDGL::::VEMADGRVVGLVRVD:Q:A::L::GGQNSLAASLSSAIDEQVRDIPFRIY
pNG5087         TRLERVMPHGIERIDGAYVGAVEVE:A:MS:Q:::K:EKAVKSLTRLSESLTGRAKLHVT
VNG6144         :::::::::::::::::::::::::T:SG:V:QLT:::::::::::::::::::::::::
rrnAC1061       :::::::::::::::::::::::::G:DSDT:AESS-:::::::::::::::::::::::
pNG6105         :::::::::::::::::::::::::T:S:SSET:D:A:::::::::::::::::::::::
Hut2390         ::::::::::::::::::::::::::QT:DEQSN:ND:::::::::::::::::::::::

consensus       ----------------LADPAPGE------------------------------------
#oth            221111111111111135324343332323323322322221222122212112222222
HVO_C0035       ST::::::::::::::TR:EK::TVVAQRYEERALDPTTDVDQSDVLLGTA::::::::D
pNG5087         TAEVDNESHIQAHIDR:D::DAKSHSIFRGVLMEFVNRYTDDSGNVETETELQRKYYIVV
VNG6144         :::::::::::::::::TN:TSV:GTALYILLAVLVGT:::::::::::::::GRKFLWD
rrnAC1061       ::::::::::::::::--------::::::::::::::::::::::::::::::::::::
pNG6105         ::::::::::::::::T::E::D:::::::::::::::::::::::::::::::::::::
Hut2390         ::::::::::::::::HSA::S:-::::::::::::::::::::::::::::::::::::

consensus       W--DDDIEERQFTDD------------------YD--------AERE-------------
#oth            132121434533434111111111111122222423323332233321111111111111
HVO_C0035       :LT:G::PNWNAREW:::::::::::::KHYVAV:AAPSDALGPTD::::::::::::::
pNG5087         :VT::::HDL:MNS:SIADYLTGIPVIGRLFTRF:SDTLTD::::::EFKAKKLHDRLET
VNG6144         :YSE::E::VE:S:L::::::::::::::::::L:EETIEQGA:::Q:::::::::::::
rrnAC1061       -::EE:TPAFDVV:I::::::::::::::::::--::::::::ESDR:::::::::::::
pNG6105         -::EGEDA:S:::V::::::::::::::::::::E:::::::::DG::::::::::::::
Hut2390         -:::E:S:T:EV:VE::::::::::::::::::::::::::::QSH::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111112222122221222222221222222222222222122222221
HVO_C0035       ::::::::::::::::SLWDIANPLVDTGVETVSDEQVWKKTNKRVQTVVDAINSVGELE
pNG5087         VDRAVNNMFRCRSRSVSPHELAHLTEDYWACETRSEREYEEAASVSPVTYSARELIKHGE
VNG6144         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1061       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
pNG6105         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut2390         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------ALDGIAEIHQSLVAPSAIERT-PAAIRTGE
#oth            222222122222222221222112222222414333131321121341122135133322
HVO_C0035       AERVEAAEALSMARNYWGRTDEVGGPLAGDV:A:ET:AGH-V:N:ETFDEQ:RGWVDL:D
pNG5087         GATAHDAAEGMDTDDVGGTDYEVDETDFVSQ:HRPG:N:R:::::TD::WEVDH:LIDQ:
VNG6144         ::::::::::::::::::::::::::::::L::D:::S:KTVT:SA:::WE:TR:AQV::
rrnAC1061       ::::::::::::::::::::::::::::::S:ETP:D:::::::::E::::::T::::::
pNG6105         :::::::::::::::::::::::::::::::V:::P::::TV:S::S::::::S:L::DT
Hut2390         :::::::::::::::::::::::::::::::VGTVP:::::::::::::::::::::::D

consensus       RWARTLWIGEYPDAPMDGFLEELYAAAETRVTDVSIHIDPRDTDAALDELENKIEDLQAD
#oth            32132112231.23141141141334223341.223121.31333133313331311332
HVO_C0035       EF::::::A:::TETESMW:SR:TSIRGIN:-:LCVNA::V:K:::IH::SQ::A:VGSE
pNG5087         TYT:CF::ET::EH:TS:M::Q:LLDTDLA:-::::::::Y:A:T:VSVMKEW:SS:KM-
VNG6144         Q:TT::Y:AN:::Y:N::Y:S::FEMTDVQF-:LTA::T:KNQER:RN::QDIAD:::V:
rrnAC1061       :::::F:::QF::::R::LF:N::ST::::M::I:M::T::::QTT::S::::::::E:E
pNG6105         Q::QS::V:::::::::::::K:::::::QQ::::::::::::RET::S::::::::E::
Hut2390         :::K:::A::::::::::::::V:::::::T::::::L:::::Q:T::T:::R:::::::

consensus       LEYLQEKRRASARGVEKDLADAQEMYDVLRNTPMQAFDVSMYLTVRAEDR----------
#oth            432332223243322333353343312311224333111121232112331111111111
HVO_C0035       GMDR::DGDVTTMD:DDANDANVK:RKL::D::S:PW:::T:VV:::DNEAALNTADETL
pNG5087         --LQND:GELE:EDI:QEVHQ:KYIRQMV:RNHTSL:R:GAFIRLT::TE::::::::::
VNG6144         ADLE:SV:S:Y---LQERANE:AAT:KAVE:GA-NV::QG:FI::::DEK::::::::::
rrnAC1061       ::::S:::::G::::N:::Q:Y::L:::::::S:E:::::::::E:G:TN::::::::::
pNG6105         Y:::T::H:::::::::::E:H::::::::::T:::::::::::::GN::::::::::::
Hut2390         ::::T::H:::S:::::::::HE:::::::::::E:::::T::A::G:::::::::::::

consensus       -----------EDLD--AQDVATAARRAPANLTPVAPRWRQLDALTSASPIGTDEFNEEL
#oth            1111111111122233243415321133.1.211232333.34314211.2241332423
HVO_C0035       SAVESFDGAKHAA::EAE:::RDLLTTT:::V::I::SLV:GTL:R::::LT::VW:D:T
pNG5087         ::::::::::::::RKQTNRLE:LL:DS:S:CGVKRTTR::EAG:VTV::::AN:LGQ--
VNG6144         :::::::::::D::QDAV:K:KS:L:DD::::::KTAIC::DL::Q::A:::DN::G---
rrnAC1061       :::::::::::::IT::SET::N::::::::::::S:::A:::::I::::V:V:KM:L:Q
pNG6105         ::::::::::::NI::::ES:S:T::Q::::::::T:::S::KTF::::::AL:Q:::T:
Hut2390         :::::::::::D:S::::S::I:T:::::::::::::::S::::::A::::A::::D:T:

consensus       --DRTTPMLGGAVGAMF--PFVSGAL-AEPGIEYGTYALNESPLILDRFARQTGYCMMVI
#oth            112442322.212.11111.13233322.4.212.3233.4.213111121321234222
HVO_C0035       PA:KSRRVP:AVI:S::::::CGVSIQE:S:MDW:RNEQ:G:L:R:SP:E:GGAPHQLT:
pNG5087         ::N:LSS:T:E:L:SL:::::S:NY:RM:D:::::LHGH:D:S:LI:PWELE::HSEL:T
VNG6144         ::-::SIA:::::::LLSS:HNATI::E:G:V:F:IHKD:Q::VVI:P:::DN::A:FTV
rrnAC1061       :::TQ:::::::L::::::::::::M:::H::::::::::::::L:::::::::::V:::
pNG6105         :::SK::::::::::::::::::::F::::::::::::::S::::::::K::::::::::
Hut2390         :::A:::::::::::::::::::::F:::::::::::::::::::::::::E::::T:I:

consensus       GRLGAGKSFSTKLRLMRRAMQDEDTILIMLDPLRGFAGVAEALDGERITVGGSRGLNPLE
#oth            .4212..122223323.333524123313111342221233212113111213322..11
HVO_C0035       :QTR:::TY:ASKAA::WWLERDGRT::TI:TQQ::D::TRLCN:KH:E:DA:QSV:::R
pNG5087         :MP:G::THG:QA:A::MLKKRS:VKQ:YI::VGDMH:S:KM::AKT::IS:ETP:::C:
VNG6144         :DT:S:::::S:QNFI:SVE:SKGR:G:I:E::NNW::::::::AK::::::TL::::::
rrnAC1061       :K:::::::::::Q:L::::H:Q::V:V:::::E:::SLND::G:::V::::::SF::::
pNG6105         :::::::::A:::::V::::F::::VV:::::M::::::N::::::::::::R:::::::
Hut2390         :::::::::A:::::V::::Y:::::VV::::M::::::S:::G::Q:::::T:::::::

consensus       IKPTPDHVLDAV-EDLDPWGEQIDWVMTFFENFFEHVADNPLGERSQTLRRAVQEAYERQ
#oth            142113211343131431242234223312311133322431222432133343422334
HVO_C0035       :TAPS:DPQ:CA:---REFRMTVEETVA:LT:LLRSDGVDNAD:FAPI:SQ:AESTLS:A
pNG5087         MH:::Q:::EQS:P:MQ:VSAKK:E:YGVI:::LQ-SR:VD:EMH:GLITFLIDKIFSES
VNG6144         :RE::E::QR:MG::AS:FN:KL:DA:S:LT:::A-LRGIS::D:RT::ELGLKR::K:N
rrnAC1061       :Q:::TT:::T::P:::::A:::A::L::::T:::Q::G::::D:K:::::C:::T::Q:
pNG6105         :::::::::QE::D:I:::::::N::::::AT:::::::H:::::N::::::::::::KR
Hut2390         :::::E:::::::::::::::::T::::::GT::::::::::::::::::::T:A::RQ:

consensus       GI-TRDPATHD-NPSPTIRDVIDVLEDMVEDPEEF-GYVTDG-EQEAVRTDAESLLIDLR
#oth            1.123112.131441.222122312232433.2311234222112232242142.133.1
HVO_C0035       ::DAHQ:E:FN::GN:NLS:F::T:I::N:S::KY:TWSD::H:V:SHK:QVGE::TK::
pNG5087         D:DPA::S::TPEN::DLS:FLE:VDRLQ:E::M:P:AT:ES:S:QKIQQY:NE:S:A:H
VNG6144         ::::D:IS:::::::::::GMM::F::::NN:::::VVRS:E::AGKIKE::TW::DQ::
rrnAC1061       ::::::::::::Q::::V::::::::QLLD::AA::::::A:::::N:::::::::::::
pNG6105         :::::::E::T:RD::::H:::T:::E:::::::Y:::::::::::::QS::Q:::K:::
Hut2390         ::::::::::A:KA::::::::A::::FAA::G:::::E::::::Q:::R::::::K:::

consensus       PSFREGGALANLAKESEFDI-DS--KVIYLDLHQEEGS-RGRAETSLMMQLLFNSVYERA
#oth            11.23215321.3412121132222222....2131.21322222222111121411222
HVO_C0035       S-:Q:::KYEA:VG:D:I::VSDDVEMA:::::SLS:::-DD::K:A:LM:MLSQ:RKKI
pNG5087         :-::P:STFG::S:::DLRLI:DSS:AV::::Q:V:::GS:LGKQ:FI::::LSTL:QQ:
VNG6144         :-:EAD:RH:::GQ::D:::R:E:::::::::A:Q::::-VDSS:A:T::::ISL:::::
rrnAC1061       :::::::D:::::EPT:L:::A:::D:V:::::::::T::::S:::::::V:::A:::::
pNG6105         :::::::E:E:::RP::::L:::::::::::::::::T::::::::::::V::::::::V
Hut2390         ::::DE::::::::PT:::L:::::::::::::::::A:Q:::::T:T::V::::::::V

consensus       KQTDKRVVFAIDEAHYLMNDAASLDFLETAVRHSRHFDLSLEFITQTGGEF----ALTPE
#oth            .3332211251...111221242132.2222.1311312114221.1331.111132231
HVO_C0035       :TAPGET:LML::::V:LDNPRTANW:QK:A:EFARY:A::W:LS:SPKD:VSADSE:DA
pNG5087         :NMQQK:EII:::::::F::D:N:ES:NQIA::Q::AG:R:VMLS::LS::::::EDKGA
VNG6144         :VSE:E:::Y::::R:I:Q:::::A::::VF::H::H:::IRLV:::VD::::::FEHA:
rrnAC1061       :::::::::::::::::::::T::::::::::::::Y:I::Q::::::::::::::::::
pNG6105         :::::::::C:::::::::::V::::::::::::::::::::::::::::::::::::::
Hut2390         :::E:K:::T:::::::::::S:::::::::::::::::::::V::::::::::::::::

consensus       ARTIANLCSITVIHRVNEEDDEIAAWFGLNDRQVSWVQS-AKAGN----DEDGYSEALVG
#oth            222.222.332331.3224323415211.23313421231.22.21111333.1.11.22
HVO_C0035       RD::RGQ:GMVH:F:TPAV::DVL:E::::QT:REF:REK:VR:K::::SGR::::C:IY
pNG5087         :EE::GM:P:K:H::EP:LG::T:TSA::T:E:Q:YI:H::E::KESLG:GQ:::Q:::R
VNG6144         SEA:LDQ:AVKQF::LDGM:E:W:DE::::YA:MRF::D::VP::::::EDA:F::::::
rrnAC1061       :::::::::M::::::D:AAQQL:E::::S::E:D::::::::::::::GA:::::::L:
pNG6105         :::::::::L::L::::::KEK::K::D:SE:::N::T::::::E:::::::::::::::
Hut2390         :::::::::::LL::::::::K::Q::D:::::::::T::::::E:::::::::::::I:

consensus       VDQ-EGWFPLRIRASDYEAQVID------------GGGDDA-------------------
#oth            21312113123121133.341123232222222223421233332322122222222222
HVO_C0035       AEDIA::I:TYVET:PA:DA:LSWSR:::::::::DD::E::::::::::::::::::::
pNG5087         ::E:H:DY::T:KT:WE:K:I::LDADAEDALDVVAHEA:SRAADFEEFVRSKAVEQELA
VNG6144         ::G::-:RGIQVK:MPK:K::::FDPTSQVRSSLP:A::E:VDTEMQEFQEKLEHRTTNG
rrnAC1061       ::E::::::I:V:::E::VE::-::::::::::::--::--:::::::::::::::::::
pNG6105         I::::::::::::::::::H:::::::::::::::::AA:VAELEPEP::::::::::::
Hut2390         I::::::::::::::::::S:::::::::::::::::::--:::::::::::::::::::

consensus       -------------------------SVANDDSQP--V-ADGGADAET------------
#oth            21111111111111111111111321333323334434321154331323212111111
HVO_C0035       :::::::::::::::::::::::::-L:D:QG:DRT:A:A::D:---::::::::::::
pNG5087         NRGLSPEKAEHVLNGLSEDELVDVV:::L:QT::EA:V::::IE:::DTEFDTTENSNE
VNG6144         T:::::::::::::::::::::DET:EL:E::DAVEAEP:::SME::NDG:::::::::
rrnAC1061       :::::::::::::::::::::::::---------::-:---------::::::::::::
pNG6105         :::::::::::::::::::::::TT::T:P::R:AGTR::::EPTS:TTQEDD::::::
Hut2390         :::::::::::::::::::::::::---------::-:F::::::G:::::::::::::