4 genomes BUD1967 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0491 HVO_0577 Hbo0948 - Hut1317 - - -

Pairwise sequence scores
Consensus score	567	rrnAC0491	Hut1317	Hbo0948	HVO_0577
466	rrnAC0491	653	467	361	366
460	Hut1317	467	567	357	390
439	Hbo0948	361	357	551	395
462	HVO_0577	366	390	395	563

83 symbols
consensus       ---------MSPDAHS-DDRGCPKCGHTETDVDSIATTGGGLSKMFDIQNRQFTVVSCAN
#oth            111111111.2223221211.......21.1211.1.1.1....1..1.111.1..1.11
rrnAC0491       MLGREQLRV:PS:T::T:::::::::::G:::G::S:::::::::::::TN::Q::T:T:
Hut1317         ::::::::::V::S:::-:::::::::E::::GE:S:::::::::::::TNS::::::T:
Hbo0948         :::::::::::HE:RN:G::::::::::::EM:::::S:T::::F::V:::S::::T::S
HVO_0577        ::::::::::::PPSA::RD:::::::S::EI::::::::::::::::::::::::::::

consensus       CGYSELYRDTSSG-SNLADLFLG
#oth            ........222..21111.2...
rrnAC0491       ::::::::::G::G:D:::I:::
Hut1317         ::::::::::T::A:DFV:V:::
Hbo0948         ::::::::KK::::-::::::::
HVO_0577        ::::::::GQ::::-:FV:::::