[M] (WcaJ) COG2148 Sugar transferases involved in lipopolysaccharide synthesis 4 genomes BUD1972 5 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG0011 rrnAC1586 rrnAC3236 - - Hmu2422 Hut1689 - - -

Pairwise sequence scores
Consensus score	3537	rrnAC1586	Hut1689	Hmu2422	VNG0011	rrnAC3236
2490	rrnAC1586	3511	1965	1769	2164	532
2624	Hut1689	1965	3634	2153	2015	715
2548	Hmu2422	1769	2153	3548	2041	733
2787	VNG0011	2164	2015	2041	3630	832
832	rrnAC3236	532	715	733	832	1083

487 symbols
consensus       -M--GWRYRI-SV-GV--LTAVAVAVANNPLVQSVTGLLPVLSRLPADPAEGAEFLFEAG
#oth            113321111232231233233321423142233233333113341231224241333134
rrnAC1586       M:DS::::::A::T::IV::::::::V::AT::::VTTI:::::::T::PT:S::T::LL
Hut1689         ::ETH:::::TG:F:TAIIAF:G:VLS:E::IR:::::V::::T::::R:V:G:L::::T
Hmu2422         :-::------:--:--:::IVA::S:::H:::H:GFR::::VGH::F:::::R::FI:::
VNG0011         ::LG:::::LG:IA::CL:::L::G:::S:TG:AL::A:::FAQ:A:::PGV::G:L:VS
rrnAC3236       :-::------:--:--::------------------------------------------

consensus       TTAVVVLAACAPLYKPRPRRILDAVMLAQKRTLVALLALATIGYFDYTYRLPRATLLAVG
#oth            224312342431111111212124333132123222231121111111121113122422
rrnAC1586       V:IG:AVSVFF:::::::::::N::T:::::V:::A:V:::::::::::::::L:VVL:T
Hut1689         :AT::::::M:::::::::::::TW:K:VR::IL:::S:::::::::::Q:::::::VT:
Hmu2422         :::::::L:L::::::::H::::IS:F:L:::::G:F::::::::::::::::::::I::
VNG0011         ::VC::AV::L:::::::::V::V:V:::::VV:::F:::A::::::::::::T:::::T
rrnAC3236       ------------------------------------------------------------

consensus       PLLLVALPAWFVWIRRRP-PEAGERTIIVGDDLAEIERILAAIDRPLIGYVCPPSAYRTD
#oth            331212313211311311234433121221123431323333224224112212333333
rrnAC1586       :::::T:::::::::E::::SS:::::V:::::QV::EVASEVNE::L::L::TN:V::R
Hut1689         GF::::::L:::A::::::A:T::::::I:::A:P:RE::R:V::RV::::S:::::VG:
Hmu2422         S::V::I:T:::T::S::ARGESG:A::::::PS::D:::::::I:VF:::S:::P:IV:
VNG0011         :V::::V::L::::::::T:T:AS:::V:::T:D::::LV:D::H::Y:::::TVVP::P
rrnAC3236       ------------------:-----------------------------------------

consensus       DAAP---PAIADGG-------TATNDLERLGGLSRIEDILVEHDIDTAVLAFDRTDRAEF
#oth            344331333421121111333343432331111112222123212122221123311211
rrnAC1586       NGTA:::E::::::::::::::S:GG::::::::::::V:::Y:V::V::::EHA:::::
Hut1689         :QP:AVRARKT:::::::EVPSPIET:SY::::::L:E::LDY:::::I:::::P:::::
Hmu2422         TEGSG:Q:QL:::AGSTADSL:Y:T:::C::::::LD:::::::::V::F:::E:::E::
VNG0011         ::::P:H::V::::::::SDAR:L::HD::::::::::V::A:::::V::::E:::::::
rrnAC3236       ----:::-------:::::::---------------------------------------

consensus       FGALDACYEHGVAAKVHRDHADSVLTADDDVGELVDVDVEPWDWQDYVLKRAFDVAFAAV
#oth            112122122211311211122131123233233222223111131233311311321222
rrnAC1586       :::::::::Y::S:::::::T:::::::T:::M::::EI::::I:::I:::::::V::T:
Hut1689         :::::T::K:::::::::::::V:::NGAAGS:::::EL:::::::HLI:::::L:::T:
Hmu2422         ::V:AT:H::::D::I:::K:::::VD::Q:E:I::I::::::::ER:V::V:::V::::
VNG0011         ::::::::::::::::::::::R:::::::::T:AT:::::::V:::::::G::I::S:A
rrnAC3236       ------------------------------------------------------------

consensus       GLILLSPVIAAIAVAIKLDDGGTILYNQERTAAFGETFNIYKFRSMIPNAEDATGAKISE
#oth            112322132432231112211132214121114112214211111.2111.22.112211
rrnAC1586       :::::::::IV::A:::I::::P:::T:::::V:::A:::::::::S:DE:S::PVEDD:
Hut1689         :::V:::M:GL:::::::E:::SV::S:D:::T:::::T:::::::V:D::SE::V:L::
Hmu2422         ::LFGL:LM::A::::::E:::::F:K:::::E::D::QV:::::::::::ER::::L::
VNG0011         ::L::::::L::TG:::::::::V::::::::::::::EV::::::VE::::::::T::D
rrnAC3236       ---------------------------------------------::E::::E::::::D

consensus       EDAGGRDPRVTRVGRVLRQTHLDEIPQLWSILVGDMSVVGPRPERPELDSDIETGVSDWR
#oth            11311211.1.21..21.2.....1....11.2.........1111311211132122.1
rrnAC1586       NN------:I:D::::::R:::::T:::::::::::::::::AVWTAEE:LL:ADTRS::
Hut1689         ::S:::::::::T::II:::::::::::::::::::::::::::::T::D:::ST::E::
Hmu2422         ::R::::::::::::T::K::::::::::::::::::::::::::::::R:::E::::::
VNG0011         :::::V:::::::::::::::::::::::AV:K:::::::::::::::::::Q:::V:::
rrnAC3236       :::::V:::::A::::::::::::::::::::R:::::::::::::V:::::Q:::V::Q

consensus       RRWFVKPGLTGLAQVNDVTGTEPAEKLRYDLEYIRKQSFWFDLKIVIRQVWKVLGDIAEV
#oth            2....1.....1..1.121132.41.1.1.33.112..121111212..1.1.23.3433
rrnAC1586       Q::::::::::::::::IKS:N:S::::L::K:::::::A::::L:::::::::::VLV:
Hut1689         ::::::::::::::I::L::::::Q:F:::MT:::::::::::Q::V::I::::::LCKL
Hmu2422         :::::R::::::::::::::H::EQ:::L:V::::R:::::::::A:::I:::VS::::T
VNG0011         K::::R::::::::::::::AD:V:::::::Q:VK:::I:::M:V::::::::VV:AV:A
rrnAC3236       K::::::::::P::::H:::K::G::::::I::V:D:::SYNM:L:S::::S:II::IM:

consensus       HRA----
#oth            4243111
rrnAC1586       V::ALSR
Hut1689         THG::::
Hmu2422         LAHR:::
VNG0011         F:R::::
rrnAC3236       ::NH:::