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4 genomes BUD1980 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0342

HVO_1500

-

Hmu1200

Hut1340

Hut1798

- - -

Pairwise sequence scores
Consensus score2243 Hut1340 Hut1798 HVO_1500 rrnAC0342 Hmu1200
1689Hut1340 2455 1652 1115 1114 1178
1610Hut1798 1652 2266 1075 1074 1074
1454HVO_1500 1115 1075 2255 1110 1149
1506rrnAC0342 1114 1074 1110 2237 1344
1549Hmu1200 1178 1074 1149 1344 2195

325 symbols
consensus       --------------------MILTVTPNPAVDQTIQFDEPLQSETVQRATDAQFDAGGKG
#oth            111111111111111111111.1...2.....1.14111321323.3.222.1.21..1.
Hut1340         VQRSEGKRDCRHADGPEEIT:::::::::::::::EM::EV:AD::::S:::::NS::N:
Hut1798         ::::::::::::::::::::::V:::L::::::::KMNTG:::GS:::S:E:::TS::N:
HVO_1500        ::::::::::::::::::::::::::::::::H::H::::::TGV:H:TD::V:T:::::
rrnAC0342       ::::::::::::::::::::::V:::Y::::::::::::QMAP:R:M::NK:::::::::
Hmu1200         ::::::::::::::::::::V:::::Y:::::::VT:::::A::::N:::::::::::::

consensus       INVSQFLSALDTETVATGLLGGFTGYFIREDLAADDVPTDFVTVDGDTRLNTTALAARAE
#oth            1.111122.113321.1.11..11.3.1233.43211322.13.124..1...3112441
Hut1340         ::::::V:::G:::::::FI::::::::EQ::VEY:::::::E:::E::I:::L:TPES:
Hut1798         V::::::Q::GS:::::::I::::::::EN:::TY::S::::W:E:V::I:::I:TP:N:
HVO_1500        :::AKYA::::ADVT:S:F:::HF:K:V:DR:D::GIAS::::::A:::::::V:::DG:
rrnAC0342       ::AA:::T:M:RPC:::::::::::S::::T:QD:G:E:A:ID:::T:::::::I::VE:
Hmu1200         :::::::T:M::A::::::::::::T:VT:Q:E:A:I:AE:::::EP:::::::::GG:D

consensus       YKLNQAGPTVDADAVDELIETIQAHDPDRLLIGGSLPPGMDAADVDRIASAGDWDTAVDV
#oth            .21.13..2223221.2.21333222.22211....1.1123311..1.32.1.311112
Hut1340         :HI::S::SA:R:::::::::L:D:::SVIN:::::::E::::::::::::::::::L::
Hut1798         :Q:::T:::::S:VI:::::I:SQ::::T:N:::::L::::::::::::T::::::::E:
HVO_1500        ::::HN::QIR:AD::::V::A::NE::T::V::::::::SLS::::L:R::::KI:::M
rrnAC0342       ::::::::::GESV::A:L:QVR:QS:::V:::::::::LSPNAI::::AG:::E:I::T
Hmu1200         ::::::::::::S:::D:VDR:AD:E:A:V:V:::::::LESDAI:::::S:P:R:::::

consensus       GGEVLRELDADYALCKPNREELAAATGAEVETVEDCVDAARALQERGFERVIASLGADGA
#oth            3.13131.112.32.....2..31..142121232112..43132..112.2..1.21..
Hut1340         H::LMI:::GE:EY::::::::T::::I::::ID::AE:::Q:::::Y::::::M:G:::
Hut1798         P::::S:::::::Y::::::::E::::H:IDS:T::::::KT:::::::C::::M:SE::
HVO_1500        :::Y:A::::::YV:::::S:::::::RT:::EA:A:E::EE:HA::::Y:L::::::::
rrnAC0342       ::D:::::::Q:G::::::A::GD::::D:S:::G:A:::D:FRD:::D::L::::::::
Hmu1200         E::T::T:S:::::::::::::::::ETT:::::E::A::S::G:::::::V::::::::

consensus       VLVTPDETLYAPALDVDVVDTVGAGDALLSGVLAAREQGWDDERALRAGVATSSQVVGVA
#oth            11.1121312.11.111....2....122111.213.3.31113..12..221111.222
Hut1340         :::::E::::::P::::::::I::::SMFAA::W:Y:::::::::::::::::A:L:S:K
Hut1798         :M:::E::::::::::E::::L::::SM:AA::W:::::::A::::::::VA:A:L:::M
HVO_1500        L:::D::V:S::::::E::::::::::VM::F:::::H:LS:AD:::M::L:A:R:::::
rrnAC0342       :::GDTGR:::E:::I:::::::::::::::::S:W:A:A:::T:::T:::V:::::QR:
Hmu1200         :::G::GAVH:EP:A:::::::::::::::::::SL:R:ES::L::AT:::VA:R::SQ:

consensus       GTSVPDLDDEATLRDEVRVRRLR--
#oth            .23.21.222433223.22232231
Hut1340         :P::HE::P:::M-:::::WSM:A:
Hut1798         :S::RE::P:PR:-::::IWA:DG:
HVO_1500        ::R::::E:VL:NETH:E:TTV:TR
rrnAC0342       ::A::::N:IGS:::G:T::::-::
Hmu1200         ::G:::::GVFED:SA:ET:::-::