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4 genomes BUD1982 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2277

HVO_2662

-

Hmu2243

Hut0472

- - -

Pairwise sequence scores
Consensus score2599 Hut0472 rrnAC2277 Hmu2243 HVO_2662
1364Hut0472 2398 1292 1308 1297
2384rrnAC2277 1292 2607 2214 2277
2408Hmu2243 1308 2214 2711 2242
2404HVO_2662 1297 2277 2242 2593

349 symbols
consensus       MTEATPTPGIHHVTCIAGDPQQNLDFWVETLGLRLVKRSINQDDPSTYHFFFADAEGTPG
#oth            122311........1..1...2.11.111......1.1.1....111..1.12.12.2..
Hut0472         ---M:E::::::::A::S::::::E:YTD::::::::Q:V::::T:V::L:YG:RT:S::
rrnAC2277       :::V:::::::::::::S:::::M:::::::::::::::::::::::::::::::::N::
Hmu2243         ::D:P::::::::::::::::R:::::::::::::::::::::::E::::::::::::::
HVO_2662        :A:P:::::::::::::::::E:::::::::::::A::::::::::::::::T::A::::

consensus       TSMTFFPWENLRQGKVGSGQVSRTAFRVPEGSLDYWEDRFDEYGVDYDDRVERFG-----
#oth            .......112222.1..1....1...11.11111..11.11.1...1.1111...11111
Hut0472         :::::::YPGA:P:Q::T::::T:::TI:ADAVE::V::LE:A:::A:EPR:::::::::
rrnAC2277       :::::::::DHA:::::::::::::::::::::::::G:::::::::::::K::::::::
Hmu2243         ::::::::::::::::::::::::::::::::::::::::E::::::::::::::SETQR
HVO_2662        :::::::::::SR::::T::::::::::::::::::::::::::::::::::::::::::

consensus       ------------ETVLPFRDPDGLPVELVEV-EIPDDDPTVPWTEFVPEDAAIRGFHSVT
#oth            111111111111...1..1......1...2.112.11..1211111..122.....11.1
Hut0472         :::::::::::::::I:::::::::L:::G:ADA:AG::P---AGS::PER:::::YG:A
rrnAC2277       ::::::::::::::::::::::::::::::::::::::::E:::::::::::::::::::
Hmu2243         ASDSASGDEPRA:::::::::::::::::A:::::::::::::::::::S::::::::::
HVO_2662        ::::::::::::::::::S::::::::::::::V::::::::::::::::V:::::::::

consensus       LWLADPQPTADLLETMGLERVDTEAAQGDTPGDERTRFAATGSVGKYVDVL--PTIEGGR
#oth            .211.111.32..11..2.2211.311111111....11.2121.21..1111.1122.1
Hut0472         :S:E:TES:VR:::E::Y:AT:E:--------G::::YE:PVDL:AV::LVAE:DRGR:Q
rrnAC2277       ::::::E::::::Q:::::E:G::Q:::::::::::::::::::::::::::::::Q:::
Hmu2243         :LV::::::ME:::::::::S:::::::::::::::::E:A:T::R::::::::::::::
HVO_2662        :::::::::E:::::::F:::G::E::::::::::::::::::::::::::::::::S::

consensus       QGHGTVHHVAFQTPTDEDQEAMRDAVQSAGLRPTAQIDRHWFRSVYFREHGGILFELATS
#oth            1.2........1111.21.221.311122.....2111.1..1...1.131.1...1..1
Hut0472         P:A::::::::RVTR:T-:ADW::QL:RL:::::EIV::K::E:::T:TP::V:::Y::A
rrnAC2277       :::::::::::::::::::QS::E::RG::::::S::::::::::::::S::::::::::
Hmu2243         ::::::::::::::::A::::::Q::::::::::::::::::::::::::A:::::::::
HVO_2662        ::L::::::::::::::::::::K::::K::::::::N:::::::::::F::V:::::::

consensus       GPGYTADEPLDDLGGRLVLPGEFEDRREEIEAGLTDVTIPRAESAEADD
#oth            2...13..1111..1.....12..1...2..11.111111132212111
Hut0472         E::::V::DVEE::E:::::EW::::::::::::PTLS:--------:E
rrnAC2277       ::::DS:::::::::::::::K::G::::::T:::::::::PAA:::::
Hmu2243         :::::D::::::::::::::::::::::A:::A:::::V::G:::A:E:
HVO_2662        D:::::::::::::::::::::::G:::Q:::::::::V::::::::::