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[S] (-) COG3205 Predicted membrane protein
4 genomes BUD1985 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1000

- -

Hbo0090

Hmu2893

Hut2820

Hut3043

- - -

Pairwise sequence scores
Consensus score511 Hut3043 Hut2820 VNG1000 Hbo0090 Hmu2893
190Hut3043 680 109 165 180 172
280Hut2820 109 535 223 239 233
377VNG1000 165 223 514 366 333
456Hbo0090 180 239 366 518 381
418Hmu2893 172 233 333 381 512

92 symbols
consensus       -------------------VETHRRSILKAASYRLFATSLVFGV--AFLYTGQFGSAAKI
#oth            1111111111111111112333331132122211222133122111.111..2212111.
Hut3043         MGVFDWLGRVTGGIVTRSPQQRMS:ALV:TLL::TLMVMITSS::::::F::NTSD:LS:
Hut2820         ::::::::::::::::::::RDGQT:SFDRKGGV:PGVRH:T::SR::V::::L::S:::
VNG1000         ::::::::::::::::::MADSRY::AV::::::V:::T:::TI::::::::E:::::::
Hbo0090         :::::::::::::::::::M:::::::::::::::::::::::I::::V:::::::::::
Hmu2893         :::::::::::::::::::::::::::::::::::::::V:::::::V:F::E::AS:::

consensus       GLSAAVAKTVLYYVWERLWDNIQWGRTEA---
#oth            .22.1.2..21..31..1.2314..2334111
Hut3043         ::V:N:I::GT::GY:::::RVT::L:PDEAS
Hut2820         ::T:::G::::::::::::A:::::V::G:::
VNG1000         :V::::G::::::L:::::ST:S:::QA::::
Hbo0090         :I:::::::A:::F::::::::G:::K:Q:::
Hmu2893         :::::::::::::::::Q:SS:E::LAQPE::