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4 genomes BUD1986 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1028

-

Hbo2946

Hbo2950

Hmu0583

Hut1788

- - -

Pairwise sequence scores
Consensus score7308 Hbo2946 rrnAC1028 Hmu0583 Hut1788 Hbo2950
3900Hbo2946 7299 2840 2904 1971 1971
5052rrnAC1028 2840 7541 4811 2098 1932
5259Hmu0583 2904 4811 7625 2125 2036
3362Hut1788 1971 2098 2125 7038 2172
3194Hbo2950 1971 1932 2036 2172 7160

1060 symbols
consensus       MGYRNALLFRWSRRDRLTVVVIAVTAAFLIGSALLLFTAGTYSETIAADLENAGTVT-YE
#oth            12223312231211231321.111131..2.211.122323123.2122232222322.3
Hbo2946         :RFEST::SS::::EW:S:A:::::T:::::::V::L:V:S:TS:LEG:::S:S:A:Y::
rrnAC1028       :::::::::::::::::::::V:::::::::TV::::::V:::::F:EP:A:S::::::H
Hmu0583         ::::::::::::::::::I::V:::::::V:T:::::::T:::::F:EP:S::::IS:::
Hut1788         ------------------M:::G:SI:::T::::::VSGTEQLQ:::::FDTT:Y::G:R
Hbo2950         ::::RV:S:G:A:::T:A:::::L:VS::V:A:V:GVAL:DQTT::::EY:TS----::G

consensus       SAEAARAASAERDLVLPLATATIDGTNAPVVGIPPDAPRVIQEGSA-WQ-GTIPAAPDEA
#oth            32144422343333111222232..343211.1.11.23334322231132122331234
Hbo2946         :HD::V::TDTG:::F::IRVD:::HTRT:::::::::PR:E:A:VA::PA:V:S::::-
rrnAC1028       D::HGPPEPG:DVT:::T::::T:::DLRL::::::::::LI::::Q::E:RL:TL::GV
Hmu0583         T:DGD:P::T::RV::::T::S:::KS:::::::::::::::N:::S::Q:RL::M:SD:
Hut1788         :::--L::R:G::A:F:I::VP::::::T:L:V::G:NE-------:--:-::A::TPAT
Hbo2950         IY:TPQDS:SSTA:T:T::ET:L::QQV::::::R::SALTVR:E-:--:-::SLPTP:R

consensus       GARGPVSRQRPRTRSGPDGTVDLTVIPRRRSNSFIPDSWYVANASTVDSLGATGALVIDH
#oth            12321234242224322333232222243233222233..22323213332431231123
Hbo2946         :LY:::----:::TQL:V::T:T::S:HPPEQ:IF:AE:::GS:D::T::::S:::::EA
rrnAC1028       DG:::::Q:QT::V::SNS::S:::V:QQ:GTT:LSNQ::AT::::AQRV:V::YF::N:
Hmu0583         D:::::::::T::L:::::Q:T:S:V::E:::::LQPT:::::::V::AI:T::Y::::R
Hut1788         :LASALTNGVATADV:ATTG::QVR:AG:QHVEM::::::L:ERGL::Q:DPD::V:::T
Hbo2950         ::LAAAAY:G:ES:LQS:ASGETVS:RS:Q:::::::::::TDPA:AA:F--------::

consensus       GTEATGRASDPRAGAPLVSALLFFVGGAEQVLRALGIAAAAGGLLVLVVVYSVTRMSVRD
#oth            333333333332413..31.131212.22122221321211212.1212111.1111111
Hbo2946         :G:PA:I:QWQEQ::::IG::P:L:S:LG::I:T:T:::VG::::I:::::N:::::I::
rrnAC1028       SPSG::LG:L:SE:::::::::YVL::L::::W::::::::::::::I:::N::::::::
Hmu0583         DS::DSGNAI:ET:V:::::::YVL::I::::W::S::V:::::::::::::::::::::
Hut1788         ::D:IE::::-:DAI::RG:AR:::S::QEA:SLF:VIV:GVAG::G:I:F:::::::Q:
Hbo2950         A:QV:I:SV:G::AT::L:::E:::R::GELV:L:RL:TV:A:I::A:TI:::VQIT::E

consensus       RAPAIRVIRSTGASPRRVGALFTARAALLVAVGVAIGYAVGLIAIKAVVNAAIYLGLPIA
#oth            .433.213.1..121231321122.1431131.122.113...231131.11213.1.22
Hbo2946         :H:E:::A:A::I::I:LF:VLQG:VLG::GT::IL:F:I:::TT:::I:::T:A:::VT
rrnAC1028       :LD:::::::::::GW:::L:::L::G:::TT::VL:::::::L:::L::V::FV:::::
Hmu0583         :TE::S:::::::PGWH::L:::::::::::::::::::G:::::::I::::V:::::::
Hut1788         ::KT::IV:A:::T::A:R:::::::TIVTV:::::::::::::ARVA:::SVF::V:VS
Hbo2950         :R:D:A:L:::::T::Q:LQ::AL::VT:T:::T:V::GF:::LVRV:::::::G:::TS

consensus       LDATVTGPSLGVVVGIAGLLVGMGVLAGALAAYPAARRPPAALGNRATR----DGQSGAG
#oth            12332133323113233232122.321.31.12122232..2124243322222232233
Hbo2946         IR:V::SDI:WA:LQ:G:F:L:::::::V::SV:VV:GS::TI:-:S:N::::TT::I:T
rrnAC1028       ::I::::Q:AT::A:V::IF:L::LV::::::::::T::::S::::H::::::S::::QS
Hmu0583         ::V::::G:V:::G:::::::::::V:::I::::::S::::T::H:RA:LQSST:A::-:
Hut1788         ::LSLSR:A:::L:PLYLGV:LL:AI::Y::SR:VS:I::::IRSSGGG:::::PTT:GW
Hbo2950         :S:QISQ:V:S:L:PAVV:FLVV:G:S:L::::KG:TQE::::AKP:RQTADA:TSRF::

consensus       RLATLRSWVKPTLLSWRAVVPTAATLTVFALTLLLLVAIAGAAAPLGDTAGGT--ITEAG
#oth            32233313132111311111..22.22..433311211311122.2323322.1111111
Hbo2946         :VRERL:L:Q::FVD:::::::TT:VA::V:VI::TT::G::L:::AT:SS::::V::::
rrnAC1028       T::::::::T::F::::S:::::::::::GI:F::V:SL::L:S:::GE::::GT:::::
Hmu0583         :::R:::IL::::::::SL:::::::S:::::V::V:::::L:S:::GD::::GT::::D
Hut1788         IREWIPG::DL:::RF:::I::I::I:::LTL:VV::STGT:V::MV:SGDA::::V:P:
Hbo2950         L:E:CS:FL:TR::G:E:L::::S:::::MCA::::T:V:::VG:AS::D:Q:::::QPD

consensus       APHPLNSRLDAEYASALRAQGIPASPEILYAQVRDGQPYLARGANYSAFANVSGATLVEG
#oth            22..21.222231.31.323223....11112232.2.22.1.1213212211122211.
Hbo2946         IT::::::ISE::::V::S:N:T::::V::::T:N:E:::::::::T::SA::NT:V:::
rrnAC1028       :::::::::::::::::S:D:T::::::I::::S:::::M:H::K:D:::::T:::::::
Hmu0583         :::::::::::D::R::T:S:T::::::I::::::::::M:H::D:EM::::TN::V:::
Hut1788         SV::VA:SVPESF:TV:EDR::D::::::LFPIV::E:T::::VDF:S:::::::S::T:
Hbo2950         ::::IA:NVPVV::D:::S:EAA::::::LFE:YE:D:IV:::V:F::YREL::VQIT::

consensus       RAPAAADEAVIGTDLARTLDLSVGDTVTVGGSVTPGVRRFTIVGRYDAPGILDDQLLVPL
#oth            22.3431...1.31..3221111.112321..13221213211.31213113112.2211
Hbo2946         :T:::Y:::::::S::D:::V:::E:IM:::::::::::L:::::FSGD::T:::::I::
rrnAC1028       QR:QRH::::::S:::Q:::VE:::EL::S:::K:::::V:::::::::RT:::L:IL::
Hmu0583         :T::T:::::V:::::::::::::::::L::::A::::Q:EV::A:::H:T:::L:V:::
Hut1788         :::RS:::::V:ES::ARRN:::::::L::::TRSAFT:T::::S::::::YESH:::::
Hbo2950         S::NQRY:::::A::::SS:::P:E::VI:::T:AS:A::N:T:TFTGT::Q::::::SI

consensus       PSARDLAT-APGQVHMIRTAGDV------------LAAAQSGIVVTELSGPRTVTVNRTI
#oth            3223312123322..31.241223333321111213334321332233122331331434
Hbo2946         QTGQQ::::DSKT::L:::N::TLDFER:::::::F:GQS::::::::::SSS:E::H:Y
rrnAC1028       D::A:::::G::::::::VK:P:SEIDDA::::DGV::N:::A:::G:::::R::KGD:V
Hmu0583         R:SWG:::::R:::::::V::::PSGAESGTPVGGESTD:T:LAI::FT::E:::QGEN:
Hut1788         :T::::S:R::::::VV:ATR--:::::::::::::P::G:::D:VDV:A:A::VR::SF
Hbo2950         :A::EMGNIRDDS::FV::R:--:::::::::::::DRETAATSTLVATSA:LRN::NRT

consensus       TLTVAVRNLGRTAATREVTVRYGNTRRNRTVAVPPGQSTTVTVTFTAAEPGTHTARAGEY
#oth            2211223.2.43312.3131233233132112112123233313233333.233222113
Hbo2946         ::::RGE:::KK::::N::::AD:RT:S::LS:G::E:GAAD:G::F:::::::IT:A:M
rrnAC1028       :::I::::V:NER:D:::::::QGD::TT::::::::ER:G::SV::S:L::AN:T::::
Hmu0583         ::S:T:::F:D::GS:A:P:E:::Q:A::::S::A:GQ:::E::VV:EQT:EVR::T:::
Hut1788         QT::TAV:V:::N:::T:SI:VA::S::V:L:I:::ER:ER:T:LSV:R::IWSI:::SA
Hbo2950         GVS:::T:::LSE::::FEIKL:S:V:K:S:T:GSQ:::R:F:P:DETPS::::LAV::I

consensus       THSVTVVSPNAIR-----IPARLPRTAPPGSGLAVPVSTGTGEPVTNATVTLGGRTVQTN
#oth            .2313.32.12231111122342.2311211214.212233221.32.1111233222.3
Hbo2946         :K::E:F::RTL::::::L::KF::R:::::T:I::AT:RNET:::G::::::D:QGT::
rrnAC1028       ::P:::::::::E:::::::SQ::SQ:::::::S:::V:K:::R:S:::::VN:PSLR:G
Hmu0583         ::T::::::::::::::::::E::G::::::::Y:::VD:::D:::D:A::VD:V::::R
Hut1788         :Q:IA:RQ:::LQ:::::--V:F:SAVRV:ASPR:A:::AA::::D:::::::N:::::D
Hbo2950         :KN:S:GG::GESDNLSGLSISA:::::TN:TP::R::H:-DT::A:::IS::AQ::T::

consensus       DAGVARVPLPREPGNYTLTATSNNRTATHAVTIVADAE-R--------RLIGRLSVSPQS
#oth            24.2123311322.22.1123342313134332242422111111111214232312.32
Hbo2946         EQ:TVLMRV:T:::E::::IEKQ:Y:SERRTLV:EEDAPQ::::::::::::::Q::::R
rrnAC1028       SS:::V:::::::::::I::R:G:Q::::DIQ::RGT:::::::::::E:Y:E::IA:S:
Hmu0583         :E:::V:::::TE::::I::QHE:::::::LR:::GS:::::::::::::S:::D:::::
Hut1788         S:::::ITV:P--:AD:::V:ADS::V:ES::AIS:RVD:DDRSGGDG:PLVSV:IQ:E:
Hbo2950         :R:L::LA:NST-::A::V::::GERE:TT::VRD::V::::::::::A:TLDAT:::DA

consensus       GSALTRPTATVRLANPWQQTLTRNLTVVGPTVSRNRTVTLDPGNTTQVRARAPDGGRRQ-
#oth            134214.2211413...323232323231.33234.2.3242.13123224222221421
Hbo2946         :TR::K:EV::Q:::::G:FFV::VSL:T:AETEH:::EMTG::I::I:IP:S:A:LDDS
rrnAC1028       ::V::T::LR:G::::::EP::::VG:I::G:::::::YMP:::V::T:FS-:::::S::
Hmu0583         :N:::S::V::E:G:::::Q:::TI::::::GT:E:Q:::S:::G:RSEFT:AA:A:T::
Hut1788         PGFRVQ:::RIH:E:::NR:VAPE::IS:::S:HD:::S::::E::T:S:QLS---:NP:
Hbo2950         P:IF:::K::::AW:::AE:VQSS:R:T::S:EKK:P::VES:E:AT::::L:---::P:

consensus       --PGEYDVRLTSN-GTQLATATYTVTGDERLAAALASSGEYAGGTPIERAVEGVFGNVQL
#oth            111.2.232323213231211113.1.12.13111.22.313211313211231...231
Hbo2946         LT::T::L::V:D:EIV:::T::R::::::VT:T:::Q:::SQ::A:NH:I:S:::::RV
rrnAC1028       ::::T:TY:M:V::::T:T::D:E::::R:::S:V::::S::S::::::S::::::::::
Hmu0583         ::::::AF::S::::::::::D::::::::::::V::::Q::S::T:::S::::::::::
Hut1788         ::::::::TV:DDTD:E::RT:MV:::N:::V::::TH::-R:S::FS:::SL::::LT:
Hbo2950         ::A:S:T:EA:TT:AG:RV::::::Q::D::G::::Q::R:T::GG:TQ:IQVA:::IEV

consensus       LLGALVALAALSTVGSTTATFARAVHARRRAIGIHRATGATPGQILRDVLVDAVRIATPA
#oth            2221222.3211...111.2.221..12114...3.11..13222134223.33212321
Hbo2946         :FLVMI:::GV::::G:A::::H::::N::R:::F:::::SRR:L:GVLA::::KLSL::
rrnAC1028       I::V::V:S:::::::::::::QG:::::Q::::::S::::QWRV::TI:A:IA:::I::
Hmu0583         V:V:::V::G::::::::::::Q::::::QS:::::SV:::H:::::I::G:V::::V::
Hut1788         :V::VAG:G::M:::GL::I:S:G::::::T:::Y:::::::::VFVL::R::GV:G:VS
Hbo2950         :VL:V:::LSVM:::::::A:T::::TTK:E:::R:::::S:WA::T::I::TLK:G:T:

consensus       TLLAFGLAFLALAALARAGWLVFFGFRLSAPTPPAILVAAALGGVALAVLGALLATAPYL
#oth            332.3333232344.41212.22..231322331431224422212.1331.23112331
Hbo2946         IAI:::T::TVIYV:::SDV::I::IK:H::QSVEL:LGTG::AL:::IGS::GVGYAF:
rrnAC1028       :G::L::SV:::QL:E::::::::::::::R::::::T:IFV:::S::LF:::V::V:::
Hmu0583         A:::VAVGVA:ML::N:::::::::::::T::::LV::GL::A::G:::::::A::V:::
Hut1788         L:V::P:TY:L::C:SS::V:SV::VAIQPVFA:W:V:LGTAIVL::VG:::A::::TLV
Hbo2950         :V::GVI::GVVSG:LSV:E:RV::VV:EPVIT:TAV:::LV:::::::IS:T::::GMV

consensus       RASPASLL-AGDRT--P--------EGRDER-P-------
#oth            233.211.1423233311111112222341.323111111
Hbo2946         SHD:ER:::-----::-::::::::--:T:::-:::::::
rrnAC1028       T:::V:::PS::::RT:::::::DD:SV:::Q:SD::::D
Hmu0583         T:::V:::P::::VQL:TAERGRQSD::EQ:P:PDASDDD
Hut1788         :TA::RT::L:E::::-::::::::-:GI:::-:::::::
Hbo2950         :KM::::::VDRHIPV:::::::::::SG::RDA::::::