4 genomes BUD1987 5 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1110 - Hbo2362 Hmu0895 Hut0799 Hut0814 - - -

Pairwise sequence scores
Consensus score	602	Hmu0895	Hut0799	Hut0814	Hbo2362	rrnAC1110
292	Hmu0895	644	163	228	206	214
306	Hut0799	163	405	301	188	136
396	Hut0814	228	301	681	265	227
379	Hbo2362	206	188	265	625	288
380	rrnAC1110	214	136	227	288	627

106 symbols
consensus       -------MSPS-PFFDAADGEIDRAQILDEAIPIAGLIGLFAALALLPYALVLAVFEASV
#oth            111111112223123343213214422331241213.131.2221.22131322333423
Hmu0895         :::::::----:-V:L::::GL:YDR:VT:VV:::N::L::::VS:PAFV:G:L:GPE--
Hut0799         :::::::----:----------------------V::VV::GS::::::F::::::::T:
Hut0814         VGREVQT::A:P::V:KD:::L:LH::W:::::LV:::I::GS::::::L:IRLI:GSTI
Hbo2362         ::::::::P::K:::EQET:K::TT:L::::T:::E::::::I:::I:F:I:F:FLRD:L
rrnAC1110       ::::::::::PR::I:P:T:::::::::S::M:L:K:::V:V:GS:PL::IAFFGA:N::

consensus       LSVLLVLLGQFVLAVGTAVVLMYVIARAIQLAGE------------
#oth            212312123111.11.212..1...3.111.232111111111111
Hmu0895         ::::FF:V::::::::V::::::::V::L::HE:RESAATDGSADR
Hut0799         V:L::::FT:L::V::::I::::::S:::::::A::::::::::::
Hut0814         :::FF::FV:L:::::::::::::::::::::DT::::::::::::
Hbo2362         IGMP::V:A::I::::V:T::L:::T:::::SN:::::::::::::
rrnAC1110       :G:V:A:::N:I::I:AG:::::::::G:R::::::::::::::::