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4 genomes BUD1990 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1030

-

Hbo2949

Hmu0587

Hut1787

- - -

Pairwise sequence scores
Consensus score4152 Hut1787 rrnAC1030 Hmu0587 Hbo2949
1884Hut1787 4371 1226 1220 1153
2959rrnAC1030 1226 4234 2484 1596
3019Hmu0587 1220 2484 4382 1523
2216Hbo2949 1153 1596 1523 4086

602 symbols
consensus       MNGAD--------------R-RRRRYALLLGAVFAVALAARLGPLHWSPLPSTLDGFNYA
#oth            1323111111111111122122.2223.223.2221.2.2.221.111.1.111..13.1
Hut1787         :I:P:RGHSTGASCLWAPV:LS:AQ:L:G:L:A:S::V:L:M:::F:::::FNP::IV::
rrnAC1030       -MSDG::::::::::::::-:-:TGRV::IV::L:::A::::TT:::T:::::::::G:V
Hmu0587         ::A:G::::::::::::::-:::::::::V:::::::::::::T:::::::::::::L:V
Hbo2949         -V:N:::::::::::::AM:K::::FG:A:T:LVLL:::I:SF:::L::Y::::::::::

consensus       ALARETIATGAFPLDRFRADSFVFTTLLAVAGTVTGERPLYVAQPVVAITGAASCLTAAA
#oth            22112123..32..1121..122..222123122212311222..12122.122111121
Hut1787         G:V:::::::HL:::GLP::::H:::M::IWE::V:HPSRFLS:::I::V::LPS:V::V
rrnAC1030       ::::D:LR::T:::T:::::NI:::AV:T:V:SL:::::::I::::::V:::::::::M:
Hmu0587         WR:Q:::Q:::::::::::::::::::VTT::LI:::Q::H:I::::::::G::::::L:
Hbo2949         :M::TATE::SV::TG-::::LL::S:F::T:::FDAD:::::::LATTI::II:FVG:V

consensus       LARRLARRLGWRHSRTALAAGVAGGGLAVDGIYLRRSGQADEEALAFLLVPLFAIALHRL
#oth            212.1332221332123122222231...3.3111.1233..12112.12112.221112
Hut1787         F:H::TG::::SL:GRR::GSL:SLL:::::V::H::MPV::QTVGL:V:::A:LV:A:S
rrnAC1030       :VK:::QSSR::::::T::M::V:M::::E::::::T::T:::::::::L::::::V:::
Hmu0587         :::::GW::::DPG::::T::I::F::::S:F:V::::T:::::::::::::::::V:::
Hbo2949         V:::IV:DTPHLSV:PSTV:T:TA:L:::Q:LF:::TAVP:::IV:I::SLIV:VS::YA

consensus       FTTDR--RRWYAVVGLLLVAFPLLHTFSSLVAGLVLTGVLAAHLASVPSRRDLLAAGLLA
#oth            22211221..22122211231.2..112.111112112222222222221.322312212
Hut1787         MPDG:::::::V:L:A:::SL:P::NLD:M::LFA:VL:VCVRRV::---:T::VG::V:
rrnAC1030       L::::YR:::G:::VV:FA:::::::::::I::::::::::::::MI:::::AVT:LAVV
Hmu0587         ::R::RTG::L::SA:FF:T:::::::::::::::V::I:G:Y::::::::GVA:::::I
Hbo2949         :R:GQ::::::GI:::::GI::I::::T:::V::IV:ALT:L:VSRTLT::S::CGVG::

consensus       AGFWAYIWGYYR-AAERLQLTVPYVDRISAYPGLFLAWLIVLVAGLAWFQRTGARIQRAT
#oth            2..13.321.1223.232312.1112.1111...12..2111232111211212131132
Hut1787         L::LG:FV::SWGI:ALTPA::IQSQ:::YA:::LA::::LVGLL::R:S:L:T:T::LL
rrnAC1030       ::::V:M::::::F::QS::V:::::::::::::::::VV::::T:V:::::S::L::V:
Hmu0587         ::::T:L::::E:V::::G:F::::N:VT:::::::::::::TV:V::L::S::TP:::G
Hbo2949         G::::::AV:::T::TS:S:::::::::T::::::V::G::::I:VV:I:H:SL::RQG:

consensus       IGGAIGLFFAALAANAGQPVFPGTQTTPTALLVLVAALAVPALFAVVGLPAADRDRREFG
#oth            32222111123222.13221...12...231121.2212113221222113312313231
Hut1787         LT:TFAS:V:IA:V::VR:::::MG:::D:VVL::LP:LI:LTIGAWAV:LG::SMP:W-
rrnAC1030       V:::V::W:LT:G:::L:T::::::::::G:::::::F:::VV:::::::R:S::::LV:
Hmu0587         ::T::::W:V:::::V::S::::::::::L:::A:::F:::F:::L:::::VSWE:D:S:
Hbo2949         YLAV::S:::VVIL::FT:I::::V:::RTV:G::SL:V:V::A::AS:DVL:EY:GA:-

consensus       PVLLALLLAPIVIVGFSLTASLTPEYFATAMRGQTFLHLPIFVLAAIGIATLADR-----
#oth            22211.1211211211.1..2.....13..2.211.111.12122121112113.11122
Hut1787         LA:::::G:GFA:A:M:F::T:::::YN::Y:V::::::::A:FV:L::G::L:::::::
rrnAC1030       ::M:::::::::::Y:::::::::::YG::L:::::V:::V::::G::::SV:Y::::RS
Hmu0587         ::V:G:::G:::V:Y:::::A::::::D:::::HV:VYF:V:::::V:VG:::V:GRRHG
Hbo2949         -L:V::FS::A::I::::::::::::::::::A::::::::LIIS::TV:R:LE::::::

consensus       ------AGRPVA------RRRGLATVLVAGVVVAAAVSAPVAFVNLDTLAAPTVTTESEF
#oth            2222223.3221222111312223221133.12323213.2..22.12132222112111
Hut1787         ::::::M::V:PRQS:::W:Q:VS::A:V:::ICM:I:I::::AG:EY:PYKG:::SG::
rrnAC1030       PSPDGGL:S:K:::::::HSHR:::::TIV:::::V:TM:I:::::::::F::GA:::Q:
Hmu0587         TEAASE::T:::SDGGTG:S::TTVA:::I:L:S:L:TL:::::H::::D::A:::::::
Hbo2949         ::::::R:DSSP::::::-::A:RIL::LL::ATVTA:::L::I:::SGS:L:T:MP::Y

consensus       AAAEFTATRSDEDWASDHPISRIAVYFYPGNANAN-----YQPVAAWLQGGEQPSCPTLS
#oth            1121.22231333.21.1231.13223212233331111122.123.13..33.2..112
Hut1787         :::::SV:-:LPE:T::DH:::VSR::S:::SGT:TTLHRVA::FD:IE::PP:G:::VV
rrnAC1030       :::T:::DHV::Q::::::F:::VDLY:::ST:GT::::::::T:R::G::ME:::::::
Hmu0587         ::VT:::Q::TGP::T::SL::V::HT::DAPK:S:::::::::V:::::::::E::::A
Hbo2949         QGI::VS:Q:ES::V::::VT::G::VFDE::T--:::::FD:::N::T::SS::::V::

consensus       QASWTTTGAHLFPAPPERTSPAALDRWRSANDVVYSTAGLDPLVIVRP---GGNRSGC--
#oth            131.2.1..11..222232213113313231211.22312.222111.111212322.11
Hut1787         :S:::::::QV::Q::IVIDDGR:WKYMH:::RI::NSAP:::T:::::::P:LSRS:::
rrnAC1030       R:::G:::::::::GS:K:T::::GE::YE:::::D:R:::SVYL::::::::::TN:::
Hmu0587         :DT:A:S::::::::A:::::R:YES:Q:R:E:::::::::AT:L:::RSV:T:E:::YS
Hbo2949         :R:::::::::::TA:KTV::E:Y:::L:SRN:::ASN:R:::::SM::::S:QY:::::

consensus       --
#oth            11
Hut1787         ::
rrnAC1030       ::
Hmu0587         NN
Hbo2949         ::