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4 genomes BUD1992 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0526

-

Hbo3533

Hmu0554

Hut1782

- - -

Pairwise sequence scores
Consensus score1412 Hbo3533 rrnAC0526 Hmu0554 Hut1782
772Hbo3533 1494 511 528 455
858rrnAC0526 511 1489 607 566
933Hmu0554 528 607 1483 628
902Hut1782 455 566 628 1438

223 symbols
consensus       -------MWPWGHLAVAYLCYSGIARATGDRRQTLPALAALALGSQFPDLIDKPLAWTVA
#oth            1111111......1.11.12.1332232321132223122112.1.1.......1...23
Hbo3533         MAFESTA::::::::F::VL::SFF:LRYRLPP:W:GV:L::::::A:::::::::::LS
rrnAC0526       :::::::::::::::::::V:VVYTQFDPT::::AAT:T:::V:::::::::::F:::FG
Hmu0554         ::::::::::::::::G:::::LL::::-:::VS:V:VV:V:A:T:::::::::::::::
Hut1782         :::::::::::::A::G::::V:::TI:::::YG::V::V:-::T::::::::::::::P

consensus       LLPSGRSLAHSLVTAAVVAVVA--LAIAY--------RP----------RRTDLHAAGAF
#oth            1..1...1....2132213121111112211111122111111111111.122.33232.
Hbo3533         :::::::F:::::LG::IV:::::V::I-::::::::--::::::::::::L::PGEK::
rrnAC0526       V:::::::::::F:LLL::::LHR::VR:::::::::--:::::::::::::::ST:--:
Hmu0554         V::N::::::::I:::::G:AL::V:V:RAVDARDES::LGADGGTTAI:P:A::L::::
Hut1782         ::::::::::::::TGP:LLG::::L:::::::::RA::::::::::::::SY:V:TLG:

consensus       VLGYGTHLLGD----GLHAVLDGDFADLA---FLAWPLAPPPAYANPT-SFVAHFASLEL
#oth            21.232.212.11112222212.2233.21111.2..23122313322111132222222
Hbo3533         :I::YS::V::::::SYRS::T:K:HE:::::::L::F::LNTGDE::VGI:HYLLHVQ:
rrnAC0526       T::AFV:T:T:MGPTAVIG::G::LTQ:QWLR::V:::Q:::P:::D:::::EQ::::SF
Hmu0554         :::::::::S:::::::::IV:::::M:::::Y:::::V:AIE:GG:K::::G:V:::::
Hut1782         A::HV::V:::::::::::F:::MYS::S:::Y::::VLA::::ETEQ:::I:::QQF:P

consensus       DGQVLFEFGLVGLAVAVWVADG-APGLRSVWRARRRAIT--A-
#oth            11312211212.12211.2221111.22222313213312212
Hbo3533         ::::VM:L:FA:VV:LW::L::::::VTA::N:M::R::RP:S
rrnAC0526       :PY:::Q:::F:::::::L:H:::::::::T:RSKA:F:ES:D
Hmu0554         TPFLAL::L:::VSLL::N::::R:::GRIVQ:I::---::-:
Hut1782         T:T:::::A:::::I::::ILRVRS:G::L:FR:L:KM:::-: