4 genomes BUD1998 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - HVO_2058 Hbo2956 Hmu2657 Hut2859 - - -

Pairwise sequence scores
Consensus score	2250	Hut2859	HVO_2058	Hbo2956	Hmu2657
1537	Hut2859	2256	1042	1156	750
1548	HVO_2058	1042	2286	1179	640
1662	Hbo2956	1156	1179	2313	807
977	Hmu2657	750	640	807	1454

301 symbols
consensus       MDALVLGANGLLGSNVVRAARERGHAVSGTYHSEEPTFDAPLHQVDITDTEAVREQLDER
#oth            133222112111112113323232322312122221221311222112222223231313
Hut2859         ::I:::::G::::::::HH:L:DDF::::::YEA::SV::::AK:::R:R::I::::E::
HVO_2058        :Y:F:T::::::::V:::TL::Q::::V:S:::::::::C:::::::::::R:V:L:::Y
Hbo2956         :QL:I::::::::::::T::QD::WRTT::::::R::::I::::I:::N:D::QRV:S:V
Hmu2657         ------------------------------------------------------------

consensus       RPDAVINCAAMTDVDGCEENPEVAHEVNARAPGDIASACAERAIPFIHVSTDYVFDGTTD
#oth            3213121111211112113232212221231113212313223122311........222
Hut2859         :::::::::::::::A::TASG::::I::E:::Q:::::::::::LV::::::::::D::
HVO_2058        DV:L::::::Y:::::::S:::::TA::GT::::L:AV:DD:E:::::Y::::::::E::
Hbo2956         E::W:V::::::::::::::T:H::::::::::E:::Q:V:SS:R:L:::::::::::VN
Hmu2657         ------------------------------------------------::::::::::QR

consensus       GPYEESAAPAPIQEYGRSKLAGENAVRERNPDALIARLSFVYGAHRASGDLTGFPAWVRN
#oth            12.2.213.3.1.1..3..23..32.22331111.3.1..11.3113222.1...1.113
Hut2859         T::T:::T:N:::V::E::RD::VR:::SEAETI:V:P::I::V:::::E:::::::::D
HVO_2058        :F:::GDE::::::::::::T::H:::DV::::::L::::::::RGDTS::V:::Q::AS
Hbo2956         :V:::DD::Q::::::K::F::::E:V::D:::::T:::::::M::G:DQ:::::::::G
Hmu2657         T::S:::D:D:A:V::Q:::V::Q::HGEV:ET::::::::W:I::SR:::::::::I::

consensus       RLAAGETTPLFTDQWVTPSRAGQAAETILDLIDADASGLFHVASQSCVTPYEFGEAIAEQ
#oth            11221121......21..1...22.2.212.122232.11...22.112.12..22.122
Hut2859         ::::::S:::::::::::::::AT:S:::A:LETEFH:TV::::R:::M::T::Q::CR:
HVO_2058        T::::D:V::::::TM::::::NV:T:T:E:L::GV::T:::::::A:::SD:::K:C:V
Hbo2956         ::LD::Q:::::::H:::T:::::::::C::::::E:::::::A:::T::::::A:::G:
Hmu2657         :HQSD::V::::::::::T::::::::L::::GQ::T::::::CS:::S::::::M:::Y

consensus       IGADATLLEEGSQADVDRPAARPTRSCLNVSRVESTLGRSQPTLEADLAAIEDAFSD---
#oth            322212.1221123112.2.2..221..2.23..22.112...123.13.2221123222
Hut2859         MD:P:V:::::::TE:::A:::::DT::A:D::::V:D:P::::::::T:::PWL:G:::
HVO_2058        ::G::::I:SSVM::L:::::::R::::D::N::GE::C::::::D::::L:A::::YSS
Hbo2956         L:M:E:::TQ:::S::N:::E::S:T:::::K::E::::A::::TT::D::S:::DTATL
Hmu2657         VN:GED::S:::IE::E:D:T:::Y:::::EH:::::::::::IRE:VE:VR:::R-:::

consensus       -
#oth            1
Hut2859         :
HVO_2058        :
Hbo2956         D
Hmu2657         :