Home |  Text search
4 genomes BUD2001 4 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
- -

HVO_0443

Hbo1064

Hmu2686

Hut2471

 - - -

Pairwise sequence scores
Consensus score1378 Hbo1064 HVO_0443 Hmu2686 Hut2471
997Hbo1064 1446 863 766 766
1069HVO_0443 863 1524 808 880
1030Hmu2686 766 808 1371 959
1084Hut2471 766 880 959 1389 

211 symbols
consensus       ----VKSGVRALGIAESYTGDA------------------ESTLAGAVVRADRVVDGFAF
#oth            11111.1.2....1...221231111111111111112221.1.1.1....1..2..211
Hbo1064         VTPT::::T::::::::::D:G:::::::::::::::VEA::V:C:::::::::I::A:Y
HVO_0443        ::::::::S::::V:::SP:A:RAPTDDADDAHFSTDPSP::V:C::::::::::::L::
Hmu2686         ::::M:A::::::V::::R:ST::::::::::::::::::-:::::V::::S::::::V:
Hut2471         :::::::::::::::::F:::S::::::::::::::::::-::::::::::S::T:::V:

consensus       GSCTVGGSDATDAIADLVDRLDREDVRYLLVAGIAPAWFNLVDLARLADATDRPVLSVSF
#oth            11.1...2.1.12.131222.1.1...111.1.1......1..131.121211..1.111
Hbo1064         :T:::::T:V::V:RG:FSN:G:::::LVF:::V::::::::::R:::::V:::::::::
HVO_0443        ET:A:::D:::::::S:Y:S:::::::::::S:::::::::::ID:::A:L:::::::::
Hmu2686         :::::::::::AE:::M::::G:::::::::S::::::::V::::E:H:::GL::C:ITY
Hut2471         :::::::::::::::QM:H::::A::::::::::::::::V:::H::HEE:GL:::::T:

consensus       EESEGLEPALREAFSGEA-LDRRLATYRAQPERRRVSVNDETVFVRSVGCDDDEAAEVVR
#oth            .2.1..11.1222.11211113..21.112.1.11.21212..1..11.11312.122..
Hbo1064         :S:S::RS::KA:::::E:::T:::V:ESL:P::::T:G:D::::::::IS:::::RA::
HVO_0443        ::::::::::T:Q:::A::::::::::::A:P::P:E::G::::::AA:::G::::Q:::
Hmu2686         :::::::S:I:D::DDS:VV:D::S:::::::::P:::A:G::Y:::::I:V:R:G::::
Hut2471         :D::::::::::E:::::::AW::D::::::::E:::M:::::::::::::-SP:G:I::

consensus       AFTPEGGRPEPLRVARLAARAARRFADREA-
#oth            11..1......2....11.111123212231
Hbo1064         :Y::T::::::::::::L::SG:EWR::::P
HVO_0443        G:::T::::::I::::M:::::::::GD--:
Hmu2686         :::::::::::::::::::S::DA-::::Q:
Hut2471         :::::::::::V::::::::::D:SFGPDE: