| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 2565 | VNG0998 | HVO_B0376 | hla0173 | VNG1628 | HVO_2448 | Hbo2153 |
| 1965 | VNG0998 | 2623 | 1966 | 1896 | 1515 | 1431 | 1503 |
| 2120 | HVO_B0376 | 1966 | 2609 | 2134 | 1584 | 1570 | 1596 |
| 2007 | hla0173 | 1896 | 2134 | 2603 | 1571 | 1480 | 1513 |
| 1939 | VNG1628 | 1515 | 1584 | 1571 | 2511 | 1788 | 1868 |
| 1895 | HVO_2448 | 1431 | 1570 | 1480 | 1788 | 2532 | 2041 |
| 1957 | Hbo2153 | 1503 | 1596 | 1513 | 1868 | 2041 | 2512 |
337 symbols consensus -------MDLDFVPLGRTGLRTSELAFGTWRFGRETDAGDVEIGEQRAHELLDAYAAAGG #oth 122222224.23.31.2..13121211......13114.22.12231..2...2.12... VNG0998 :MPPTDDQP:G::Q::D:::Q::A:Q:::::::KR:ES::L::S:::::D:::T::D::: HVO_B0376 :MTTLEDI::::::F:Q:::Q::::Q:::::::K::EQ:N:::D:E:::::::::E:::: hla0173 MDPTLDEI:::T:R::::::::N:FQL:::::::V:E::N:::D:A:::::::G:E:::: VNG1628 ::::::::G::A:::::::::VT:::::::::::::::::I:V:::::::::::::N::: HVO_2448 ::::::::S:SM:::::::TTV::::::::::::QN:D:A::V:RD:::::::::::::: Hbo2153 ::::::::A::T:S:::::TKV::I::::::::::N:E::I:V:PEQ::R::::::D::: consensus RFIDTADMYGGGASERWIGDWLADRDRERFTIASKIYWQTRDGDPNGRGLNRKHLRRRID #oth 21.....2..1.22.21..1..31...12111...11.1212111.11.1...22.3311 VNG0998 :Y:::::V::::D:::::::::S::::D:Y:::::::::V::::::S::T:::TI:N::T HVO_B0376 :::::::I::::::::::::::E::::::::::::::::I::::::S::T:::NV:H::: hla0173 :Y:::::V::::DC:::::::::E:::::Y:::::V:::I::::::S::T:::NV:H:V: VNG1628 ::::::::::::RA::Y::::::::::D:YV::::V::P:ST-A::::::::::::ASV: HVO_2448 N:::::::::D::::TY::E::GE::::E:VV:::VF:P::E-:A::::::::::::Q:: Hbo2153 T:::::::::::RA:EY:::::::::::N:V:::::::P::E-::::V:::::::::N:: consensus AILDRLGTDYVDVLYIHRWDDETPARELMRTLNGLVRDGKVHYLGASTLRPNAWKIARAN #oth 31....1.1.2.2..1....12.12212.1..121.22.2.1...1..13....1111.. VNG0998 :L::::::E:L:::::::::GD:T:::::::::D::A::L:::::::::Q::::R::::: HVO_B0376 :L::::D:::::::::::::::::T::M:K::::::E::::::::::::::::::V:::: hla0173 :L::::D:::L::::::::::::::::::K::::::ES:::::::::::::::::V:::: VNG1628 N:::::::::I:I::::::::A:::DA:::::D:F::E:T::::::::FH:::::::K:: HVO_2448 R:::::::::::L:::::::::::VE:F::::D:F::::::N:::T:::E:::::VVK:: Hbo2153 E::::::::::::::T:::::D:::::F::::DEF::::::N:::T:::E:::::::K:: consensus EIARARGWEPFTVAQPRYNLVNREIEGNYLEMCRDYGLAVVPWSPLAQGFLTGKYSRDDE #oth .1.231.2...3.2...1.2.1...1.2..21213122112.....11.......4.233 VNG0998 :L:::E:::::S:L:::::::D:::::D::TFA:EQ::::C::::::::::::::::::G HVO_B0376 :::::E:::::::::::::::D:::::D::::T:S::I::C:::::G::::::::T:E:G hla0173 ::::SE:::::N:L:::::::D:::::E:::FA:QQN:::S:::::G::::::::D::ED VNG1628 :::AR::S:::::::::F:A:::::V::::::::E:::G::::::::G:::::::E::A: HVO_2448 :L:DK::Y:::K:::::::A::::::::::D::A::DIGI:::::::G:::::::A::ER Hbo2153 :::DK::Y:::::S:::::V::::::::::D::A::DVG::::::::G:::::::::NK: consensus LPAESRAAEDQRFADSYLTPENFDAHDALDAVADEVDASPAQVALAWLLHRDQVTAPIVG #oth 1122.11141111312...32...3113112..32.2.1.2.11....3.11111...1. VNG0998 :TG::K:SDSS:W::T:::DA::::::V::::::::E:::P:::::::::::GI:::::: HVO_B0376 :TG::::::SS::EE::::E::::V::E:::::G::::T:::T:::::M:::G::::::: hla0173 ::E::K:::SS::QEA:::A::::L::E:::::E::::T:::T:::::A:::G::::::: VNG1628 P::G::G:T::Q:V::::::S:::TL::VE::::A:::T::::S::::R:H:::A:::T: HVO_2448 P::D::::N:::::::::::A::::LEQVEE::EA:G::::::S::::M:HP:::::::: Hbo2153 P::D::::S::Q:V:::::::::::LE:VES::AD:G:::G:::::::::H::::::::: consensus ARTVDQLAENLAAATIDLTDDQFDRLTDAKRGPYA-L #oth ...22..5..33.1412.122.32.123.13422321 VNG0998 :::P:::S::ID::::::::::MA:::::AA::::D: HVO_B0376 ::::E::T:::E::::::::E:V::::G::PD::VG: hla0173 :::TA:::::::::S:::S:E:V::::A::S:::DG: VNG1628 :::PA::R::M::TN:E::AT:R::I:::A:R---:- HVO_2448 :::::::G::VV::D::::P:::E:ISV:::HLS::- Hbo2153 :::::::E::::::EVS::P:::E::A::::E---:-