| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2314 | Hbo3299 | pNG5111 | rrnB0080 | pNG6124 | HVO_A0028 | hla2126 | HVO_A0398 | HVO_A0453 |
| 673 | Hbo3299 | 2616 | 370 | 372 | 420 | 433 | 424 | 493 | 453 |
| 899 | pNG5111 | 370 | 2735 | 2543 | 528 | 429 | 434 | 486 | 481 |
| 883 | rrnB0080 | 372 | 2543 | 2718 | 505 | 431 | 432 | 473 | 470 |
| 1345 | pNG6124 | 420 | 528 | 505 | 2266 | 1166 | 1167 | 1023 | 970 |
| 1607 | HVO_A0028 | 433 | 429 | 431 | 1166 | 2328 | 1915 | 1323 | 997 |
| 1614 | hla2126 | 424 | 434 | 432 | 1167 | 1915 | 2284 | 1282 | 1011 |
| 1544 | HVO_A0398 | 493 | 486 | 473 | 1023 | 1323 | 1282 | 2373 | 1417 |
| 1340 | HVO_A0453 | 453 | 481 | 470 | 970 | 997 | 1011 | 1417 | 2516 |
396 symbols consensus -------------------------------MTNRYSDFEELRPTGEAAHIPDAALDDPC #oth 1111111111111111111111111112222143342131323.4213342115222343 Hbo3299 :::::::::::::::::::::::::::::::-----M:D:GRI:RE:---L:GT:GGPNH pNG5111 ::::::::::::::::::::::::::::::::::ATKRVTDRN:EYDP:D:LG::SS::E rrnB0080 ::::::::::::::::::::::::::::::::::ATKRVTDRN:EYDP:D:LG::SS::E pNG6124 :::::::::::::::::::::::::::::::::DHN::R:AFQ:V::G:LV::P:::Q:A HVO_A0028 :::::::::::::::::::::::::::MSQP:H:::::::::::::::S::::QR:::G: hla2126 ::::::::::::::::::::::::::::::::Y:::::::::::::::S::::TR:G:E: HVO_A0398 ::::::::::::::::::::::::::::::::Y:::::::::::::::S::::SR:::G: HVO_A0453 LSTRFVSQLYGFSKVTEIQIQRRGKVLTDNS:NG:Q::::::::L:::TRV::DE:SGRE consensus EGGPRRQRVATSSGGYPDRTEDTDRECRSCGASIPRGQTKCRFCLTNHLGSTS--DSGDA #oth 32523222234332312142344433.52..211154222.2112432333632134454 Hbo3299 T:RQSH:HEWQFAN---HDV:ASPAH:EV::G:::PTRAR:----VD:RE:SP::RAA:: pNG5111 TR:NG:E::LD:T:-:::::::ET:T:TT::QD:::DERQ:P::AQTGISE::FD:Q:SS rrnB0080 TR:NG:E::LE:T:-:::::::ET:T::T::QD:::DERQ:P::AQTGVSEIPSD:Q:SS pNG6124 D:Q:S:::E:SH::::::G:T::::S:V:::::::AS:R::::::EHE:DGA:::E::A: HVO_A0028 ::A:::::::::::::::APTVA:G::::::::V:D:::::::::::::::DA::T:T:E hla2126 ::T:::::::::::::::APTV::G::::::::V:D:::::::::::::::GA::T:TNE HVO_A0398 ::S:::::::::T:D:::QPSGIGA::Q:::::::N::::::::::::::APT:::NQQP HVO_A0453 NA:QVEGQRRETLES:S:::RS:RS::S::::::LSNR:::::::S:::DG:::::DSRI consensus PDGEWTLLGVVHLLVEASTFYHAVAKGAAAAT----LLSGNDASPAVDDCTLIYDLDDAP #oth 3343113332232211131312.2.3.21114111112334253223231313113233. Hbo3299 T:Y::SISKTAIAIIP::NR:::L:I:SSSFR:::::RD:GHK:R--SSYE:F::I::-: pNG5111 :L::::FGR::LA::::N:DF::R:L::::FSVSDSIAT:E:T:HGTVK:RAAFGTE--: rrnB0080 :L::::FGR::LA::::N:DF::R:L::::FSVSDSIAT:E:V:HGTVK:RAAFGTG--: pNG6124 SSEQ-::R::I:F:::SG:::G:::R:::::::::::::SGHDQ:-I:::::::::::E: HVO_A0028 SAST-:Y::I:::V::ST:::G:::::G:::K:::::::A:E:E::::NY:::::::E:: hla2126 TAST-:F::I:::I::ST:::G:::::G:::N:::::::A:E:E:::::Y:::::::E:: HVO_A0398 A:T:::::H::Q:::::::V:::L::::::::::::::AKP:RD::::::Q:L::F:::: HVO_A0453 ::TG::::H::::::::::::A::::::::::::::::TKA:RD::::::Q:L::::TK: consensus AAQLTEGWPSLPDAVRVDSEEGQALLETARDRTNWTEQ--SERGEDVP--------PRLY #oth .42.234.12..312432225.23.132.3331516264434334335111111112221 Hbo3299 :QI::A::G::::::PL::ND::R:F:::V:K:D:ETTLSV:ESP::TNSPLSDSD:YIF pNG5111 ::T::K:::D::TETTI:E:P::::::::DEQ:::DGD::---:D::Q::::::::::I: rrnB0080 ::T::K:::D::TEATI:E:S::::::::DEQ:::GGN::---:D::K::::::::::I: pNG6124 :P::::R::T::A:TE:TAAA:D:::TA::E::A:N:R:::D:SQTEI::::::::::V: HVO_A0028 :R::A:Q::::::::Q:S::::EG::SA:C:::G:YG:EA:::Q:QA:::::::::T::: hla2126 :R::V:Q::::::::Q:S::::EQ::SA:::GAG:H::GA:::Q:QA:::::::::R::: HVO_A0398 :S:::DE:::::::::AT::R:DR::VL:CA::P:::PTETP:::THR::::::::TF:: HVO_A0453 :::::DK:::::E::::T::S:EQ::T:::K::EQ::STQ:SCEGAHT::::::::TF:: consensus DERGDGIRDRSRLTDLLDDADDDV---WLVPAIALRRSARAEKS-SRRPSVPTKTRLD-- #oth 225.53231512145421433543221.2..12235334344546534442136352311 Hbo3299 T:N:::LV:KD::A:FDEKPHCESHDY:V:::VLYD:KRNTTDKTV:NR:--------:: pNG5111 L:D:SPVT:::EFQQ:T:EFRE:DGTY::::GVVK:HQ::::--:------:EMIGIGFY rrnB0080 LKD:SPVT:::EFQQ:T:EFRQ:DGTY::::GVVK:HQ::::--:------:EIIGIGFY pNG6124 ::::Q::::E:S:EHT:::S:QL-::::I:::::VETVP:ET::S:T:AEI::V:A:E:: HVO_A0028 :Q::N::::P::::EI::::::T::::::::::::SE:TGGAAADRQVS::::TQE:::: hla2126 :QH::::::A:::NAV::::::A:::::::::M::TE:::ED:TN:QVSL:::SQD:::: HVO_A0398 ::E:HS:::VD:::G::EYPEN:::::::::::::Q::VDDVQ:GN:C::::S::::::: HVO_A0453 ::G:YDVSEE:::::::ER:ES:::::::::::::Q::VDD:H:ED:::NI:S::::::: consensus CRNCGRATDHQFQGHE-SVPAEAWTGQPIWECRVCGSARHGPAPE--------------- #oth .25.233.4.3143411141346231232.1.22.2241111422222222232122222 Hbo3299 :P:::E::Q:I:D:YDGGH:SVHVD:VAL:T:LT:DTT-::DT:PVGVGPDKPWEDDDYT pNG5111 ::Q::AV:G:ESH:LD:GFECHPHLDRM::T::E::QH::E:EQ:DDTADVTGYEHLPDG rrnB0080 ::Q::AV:G:ESH:LD:GFECHSHLDRL::T::E::QH::E:DQ:DDTGDVTDYEHLPDG pNG6124 :QH:TKE:E:R:STR:::L:D:T:::::::::Q:::TG:Y:::::::::::::::::::: HVO_A0028 :Q::::::::R:KT::::::D::::::::::::::::::Y::SLK::::::::::::::: hla2126 :QA:::::::::KI:::::::A:::::::::::::::::Y::SL:::::::::::::::: HVO_A0398 ::S:D:T:V::::EF:::::::N:::::M:::Q::Q:P:::::::::::::::::::::: HVO_A0453 ::K:::T:E::::EF:::I::DE:S:::M:::Q::Q:P::::D::::::::::::::::: consensus ------------------------------------ #oth 222222221222212212222222223231211111 Hbo3299 GGDRYTPEDAAEQQHKEVMRRLENEGNLE::::::: pNG5111 VSPEDIHGDEPDFQEQEFQDQISAYRERNGFFPWER rrnB0080 VSPEDIHGDEPDFQEQEFQDQISAYRKRIGSFPWER pNG6124 :::::::::::::::::::::::::::::::::::: HVO_A0028 :::::::::::::::::::::::::::::::::::: hla2126 :::::::::::::::::::::::::::::::::::: HVO_A0398 :::::::::::::::::::::::::::::::::::: HVO_A0453 ::::::::::::::::::::::::::::::::::::