| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||
|---|---|---|---|---|---|
| Consensus score | 6422 | hla2528 | rrnAC2311 | HVO_1645 | Hbo3198 |
| 4529 | hla2528 | 6495 | 3973 | 4049 | 4152 |
| 4933 | rrnAC2311 | 3973 | 6600 | 4376 | 4557 |
| 5666 | HVO_1645 | 4049 | 4376 | 6590 | 5386 |
| 5746 | Hbo3198 | 4152 | 4557 | 5386 | 6767 |
932 symbols consensus --D--PE-----H---E------------------------------------DDHAHEL #oth 221221122222122212222211111111111111111111111111111113323121 hla2528 ::-::--:::::-:::-::::::::::::::::::::::::::::::::::::---MS:: rrnAC2311 ::-::--:::::-:::-::::::::::::::::::::::::::::::::::::MS:D:G: HVO_1645 VT:AS::RDAAA:GGH:VARGG::::::::::::::::::::::::::::::::::G:DF Hbo3198 MS:ET::NEHSN:TTD:DTSSSDPRSDGGQTGEATASTIGSELTVPATTDDYPTES:S:F consensus PGTGSIKRWFVTTNHKDIGILYIITALFFLVLGGVLALLIRIQLWAPR--GADILGPMAY #oth .122.12...1......1.1..31.1....11.....1.3.31.2211221332.1221. hla2528 :P:T:V::::::::::::::::T:::::::LF:::::::::M:::D:-::TSQ::SGL:: rrnAC2311 :PKS:VS:::L::::::::V::L::::::::F:::::::F:LE:ISS-:::::L::S:G: HVO_1645 :::::::::::::::::V::::VV:S:::::::::::W:M:V::L:::AL:EG::S:V:: Hbo3198 ::M:::R::::::::::V:::::V:S:::::::::::W:L::::::::TPTTTV:::::: consensus NQAVSAHGLIMVFWFLSPFAFGFANYIVPLQIGADDLAFPRLNALSYWLYLFSGILFGVS #oth .1..11...1.....1...1......3....1..1.............1.....1.2.1. hla2528 :E::T::::::::::::::G::::::F:::::::::::::::::::::M:::::V:L:I: rrnAC2311 :::::T:::L:::::I::::::::::L:::::::::::::::::::::::::::::M::: HVO_1645 :::::::::L::::::::::::::::V::::L::K::::::::::::::::::::::::: Hbo3198 ::::::::::::::::::::::::::::::::::K::::::::::::::::::::::::: consensus FFQGGTFSGGWTMYAPLNVPTFTPD--VGASTAVLALVLFTASVTVSSVNFLTTMHRMRA #oth ....1.111.........2.211.2112.1121....21.1121.211.....11121.. hla2528 ::::::L:A:::::::::I:MY::S::I:STG:::::AM::IGI:A:T:::::SI:HS:: rrnAC2311 ::::T::A::::::::::T:AYI:GEGL::TSV::::IM:::A::LG::::::::Y:::: HVO_1645 ::::::::::::::::::::::::::::::::::::::::V::::::::::::::::::: Hbo3198 ::::::::::::::::::::::::::::::::::::::::V:::::::::::::::K::: consensus EGLTLRDLPLFSWSILLTVWMMLFAFAALLAALLILASDRLLGTTYFAL----------- #oth ..122122.2.111.11.1............1121.1..12..11..2311111111111 hla2528 ::MGIM:M:M:T::::A::::::::::::::VG:::::::V::SV::S-::::::::::: rrnAC2311 :::RM::I:I::L::N:::::::::::::::::M:::::HI::::::QYSIDGTTMATDA HVO_1645 ::::::N::::::T::::A:::::::::::::::V:S:::::::::::M::::::::::: Hbo3198 ::::::R::::T:::::::::::::::::::::I::S::::::::::::::::::::::: consensus ESPAGSLLWAHLFWFFGHPEVYIVFFPALGVMAEVFQTFTGRRIVGRKWFIIAMVLVALQ #oth 2211111..2......................1.2....1...1.....1.2111.112. hla2528 ATEG:::::G::::::::::::::::::::::L:L::::S:::L:::::V:::IC:ISV: rrnAC2311 DN:GA:::::::::::::::::::::::::::::C::::::::L::::::::S::::::: HVO_1645 :::::A:::T:::::::::::::::::::::::::::::::::::::::::L::::::I: Hbo3198 ::::::M::::::::::::::::::::::::::::::::::::::::::::A:::::::: consensus SFVVWMHHMFLTTINLEIKTLFMATTIGISLPFDLMVFALIYTLLKGRIRFTTPFLFVFG #oth ..2.........2...21..11.1...........1..1....22..111.......21. hla2528 ::L::::::::::::::::::M:::::::::::::L::S:::::I::::Q:::::::A:: rrnAC2311 ::::::::::::G:::P:::I:::::::::::::::::S::::MA:::V::::::::SL: HVO_1645 ::A:::::::::S:::QV:::::I:::::::::::::::::::V:::K:::::::::::: Hbo3198 :::::::::::::::::::::::I:::::::::::::::::::::::K:::::::::::: consensus ALLLFIIGGITGVFLGAIVLDYEFRGTYWVVAHFHYVMVGGATALFGGLYYWFPKITGRM #oth ..1...1..........1....1...............11.1...2..1...1..2..1. hla2528 ::::::L:::::::::::::::::::::::::::::::F:::::::::A::::::V::K: rrnAC2311 ::I:::::::::::::::::::Q::::::::::::::::A::::::::::::Y:::::K: HVO_1645 :::::::::::::::::V:::::::::::::::::::::::V:::V:::::::::M:::: Hbo3198 :::::::::::::::::::::::::::::::::::::::::V:::I:::::::::::::: consensus YDEFLGKLHFGVYFVGFNLLYFPLFVAWETPRRVFDYAPELQIWHQLATVGGFVLGLSFL #oth .1.2...11.211.11..11..11.21........2.3211111.121.1.1.1..1..2 hla2528 :::L::::::V:F::S::MV::SM:LG::::::::E:N::F::Y::FG:I:A:::::::F rrnAC2311 :N:T:::IQ:::::L::::::::M:I:::::::::V:PEG:::::SM::::::I::A::: HVO_1645 ::::::::::A::::::::::::::::::::::::::::::AP::::::::::::::::: Hbo3198 :::::::::::I:::::::::::::::::::::::::SAG:::::::::::::::::::V consensus IMFYNLFKSAFSGEPAGDNPWEYATTAEWAVPSPPPLENFPGRPSYRDGKLEFLDE--VA #oth 1....121.322.12111...21111....12.......1113.1.22.2.1.2122211 hla2528 :::::FA::YV::::::::::D:SR::::::S:::::::W:N::::AS:::::V--::-- rrnAC2311 L::::::V:LWR::DV:P:::::::S::::AA::::::::::V:::GT::::::::ET:: HVO_1645 :::::::::::A:D::P::::K::::::::::::::::::D:T:T::::H:::::AGE:: Hbo3198 ::::::L::S::::RV::::::FS::::::::::::::::::L:T::::S:G:R::::-- consensus --EDRIPGGAGAAAADGDGNAATDGGVSTARPAADATE---------EEHASHASIWPFV #oth 223233222321231121131211112221323132222111111112111....1...2 hla2528 ::K:YV:D:GP:VK::A:::::::::D:HSEHITKYPYW::::::::DK:P::::::::C rrnAC2311 ERTES:::A:AHGH:AT::GT:::::AV:::A::T::AMESTHEVSG::::::::F:::L HVO_1645 PS:::SS:PT:::VS::GVT:SATTA::S:L:T:E::::::::::::V:GP::::::::: Hbo3198 ::-----S:D:H:::::G:S:T:::::A::T:P::HH::::::::::::::::::F:::: consensus LSLGAFFLLLGLSGLRD----------AAFPEGMGGAFYLGFAAVGGVVTLASLVAMGLE #oth 11113122111..1221111111111112222223222.232232.112121.1.3121. hla2528 :::MTG:::F::::FA:SVTFIVGETL:STSVEISN:V:PV:II::L:GMI::G:KW::: rrnAC2311 V:::G:IAF:::::V:T::::::::::-------:SV:::SM::::::T:FG:::G:TR: HVO_1645 ::A:::LV::S::P:Q::::::::::::::::::V::A:ATT:VA::::::G:::::::: Hbo3198 VG::V:::F:::::::::::::::::::::::::T:G:::::TLL::T:::::::F:A:: consensus PFHAPEDEAAEAWPFAGVEKGKLGMWIFLASDVVLFGAFIGAYVFTRVAFGWTAWE---- #oth 1.11.23231.1...312122.2.1.2..1..111..1.11112.1.112..12.21111 hla2528 D:Y::PS:F::R:::N::::V:::V:F::::::IV::::LS:AI:V:YNA::MS:S:::: rrnAC2311 ::::::MAI::R:::DK:::M:::::T:::::I::::::::S:A:V:::Y:::::HHDLI HVO_1645 :::G:VF:EG:::::::IDN::V::::::::::::::G:::::::::::::::G:::::: Hbo3198 :::G:::V:G:::::E:L:Y::I::::::T:::::::G:::::::::::::::::::::: consensus PIPSDPIPGLINTYLLLTSSFTVVLALVAAERRSRWGLVASLGATFALGVGFLVNKGIEW #oth .222222...2..12.1....1.1..1...113112111.1.12.11..21..21.22.. hla2528 :L-TESL::::::FV:I::::::I::::::H:N::Q::L::::::I:::FT::GI:MW:: rrnAC2311 :AEHVTM::::::::::::::L::::M:::::E:KR:T::A:VG:::::::::I:::::: HVO_1645 ::::::::::V:::I::::::::::::::::K:HK:D:::::::::V::I:::::::L:: Hbo3198 ::::::::::M::::::::::::::::::::KK:::::::::VT::V:::::::::A::: consensus NHLFH-------EGLWLSTN-----VRASTFFLTTGLHAAHVIAGLVIALYLTARAWRGA #oth 3.11111111122.22111.11111121.1111.....11..11..11221121.112.1 hla2528 H:EIY::::::DV:VLIAR:PHGDP:Q::IYYV:::::GV::VI:::::CF:FV:TYQ:H rrnAC2311 :::::ISTEAFPN:WN:::::::::IAS:::Y::::::G::::I::I:CA:M:V:::N:: HVO_1645 Q::::::::::::::::::::::::::::::::::::::::::::::V:::::::::::: Hbo3198 D::::::::::::::::::::::::::::::::::::::::::::::VT:::I::::::: consensus YLEDNRSIEYFGLYWHFVDIVWLFLFPLFYIL #oth .22.3121..............1.1.....11 hla2528 :MD:E:P:::::::::::::::V:I:::::LF rrnAC2311 :QG:D:A::::::::::::::::::::::::: HVO_1645 ::::S::V:::::::::::::::::::::::: Hbo3198 :::::S:V::::::::::::::::::::::::