|
Pairwise sequence scores | |||||
---|---|---|---|---|---|
Consensus score | 3143 | HVO_1192 | Hbo0369 | hla2180 | rrnAC2469 |
2434 | HVO_1192 | 3030 | 2355 | 1686 | 1724 |
2482 | Hbo0369 | 2355 | 3064 | 1755 | 1725 |
2281 | hla2180 | 1686 | 1755 | 3312 | 2001 |
2257 | rrnAC2469 | 1724 | 1725 | 2001 | 3562 |
491 symbols consensus -----------------------------------------M--------DRR---K--- #oth 111111111111111111111111111111111111111111222222221112221222 HVO_1192 :::::::::::::::::::::::::::::::::::::::::-::::::::---:::-::: Hbo0369 :::::::::::::::::::::::::::::::::::::::::-::::::::---:::-::: hla2180 ::::::::::::::::::::::::::::::::::::::::::SPNSMDLV:::TLL:LTG rrnAC2469 MRQTRSRSINSRLLVCCPEHGAYHGRGHGYTGTCEKGYQYT:NEHDTRSI:::SVI:AAA consensus -AG--ALAGCLEGTEDTPDGGDGGDGGDGS--------TTGDSGGDSGG--QDSYTIGMV #oth 2112232...12222222222112122111111111112222212.21111322.1.... HVO_1192 :--::VT::::::E:E::AAT---------::::::::::EE::::---::ES::::::: Hbo0369 :--::-M:::::D::S::TS:-:::T::::::::::::G::TE::::::::::::::::: hla2180 G::VG::::::ST:D:GE::S::S::S:::DGSDGENG:D::D:S:D::DST:A:E:::: rrnAC2469 S::LVG::::SG:AP:EG:::::::::::-::::::::EST::ST:::-::SET:::::: consensus DSLTGSLAAFGERNQRGKELALAAINEVGIGSEGADLAISVEDDESTNQGGVAAAQKLVN #oth .111...111.2..1..221.1221.12.1112.23.3.211.11.21.1.131..2..1 HVO_1192 ::::::::PY::::T::R::::::V::::::::::S:N::::::::::::::NG::V::: Hbo0369 :A::::::PY:N::::::D::V:::::T:::::::Q:S:A:::S::S::S::T::::::E hla2180 ::Q::::S:::::::::VN:::QRV::I::--D:R::E:I:::S::E::::I:::::::: rrnAC2469 :::S:::S:::Q:::::::I::DD::S::V--S:GE::::QQ::Q::S::::S:::T::: consensus QDGVPLLIGAVGSGVSIAIHDSVTRGTDVVQISQNSTSPNLTTRPGLLRMSPSGSAQGQA #oth .21..11..2......2.111..13221...1.....111..21.2...12.1.211231 HVO_1192 :::::::::S:::::::::::::::DAG:::::::::::E:::::E::::R:::::K::V Hbo0369 :N::::F:::::::::::MY::::K:SG:::::::::::E:::::::::T::::::K:K: hla2180 :::::F::::::::::L::YE::VE::::::L:::::GL:::DF::::::::::RS:SL: rrnAC2469 :EE::::::T::::::T:::E::VQN::::::::::::::::NF:D::::P:A:K::AE: consensus LASLVNDDGHDEVAVTWINNDYGQGLSEAFAE----AFDGEVVYNEPHDQGQSSYSGTIS #oth 1121222.12131.2111.....211211.211111211.1111.1....1.11..1111 HVO_1192 :::::::::::T:::::::::::T::::V:::MFESE:::T:A::::::::::P:::VLT Hbo0369 ::QF:AG:D::K:::::::::::S::::V:::::::N:E::::F::::::::::::::LT hla2180 :SN:IT:::Y::::I:YV::::::S:TD::VD:::::Y:::::::S::::E:Q::::V:: rrnAC2469 IS::L:E::NESA:LA::::::::SVG:::I::::::Y:::I::::::::::::::S::: consensus EMASTDADAWLFITYANEFATMVNEAFDQGYNTQADYYGADSTIADNILENTPEGSLDGM #oth 2.2111.1..2.1..12.211.21.2112.1223122..11.1311311.11....21.. HVO_1192 :::::::S::I:L:::::YTV::::G:::::::SV:::::E::V::S:I:::::::M::: Hbo0369 K::::::S::::L:::::MTV:A::::::::::GV:::::E:::::E::::::::::N:: hla2180 ::N:SG:::::::::QA::::::::VYSS::--E:QF:::::VSG::V::::::::I::: rrnAC2469 S:SD::::::V::::QP:::::SQ::::L:VTD::AW::G::VKGPKV::SA:::::::: consensus KGITESAPQDQENYQNFVSAFEEEYDRQPTSWAAYAYDAVTVAAIAIEAADEFTGSALAE #oth 12111.1.212....2.113.2121133..1.1.....11221.1..1.......2..31 HVO_1192 T:::::::::::::::::A::::N::GT::V:S::::::::::::::::::::::E:::S Hbo0369 ::::::::A::::::::::R:KS:::TS::V::::::::::I::::::::::::::::KS hla2180 :IVVP:::IEE::::S:A:D:::::G::::::::::::CAIN::L::Q:::::::A::Q: rrnAC2469 :AVVP:V:::A::::A:::E:Q:RFGEE::::S:::::::V:S:L:::::::::::::M: consensus VVRDVTRPEGEEAFSFEEAAEILADGGSPSDVNYQGVSGPIDLDENGDPPGLLQVYEVAD #oth 1..1.11...1.112112.221.11..1.2.11.1.....1.1......1.21.121.31 HVO_1192 ::::::::::::V:N:::::AV:R:::::G:I::::::::V::::::::::YY:I:S:E: Hbo0369 ::::::::::Q:V:T:S::::::R::::::::::::::::V:::::::::::Y:::S::E hla2180 T::R:SG::::::T:::A:SQ::::::G:D::D:::::::::F::::::V:F:::L::Q: rrnAC2469 :::::::::::::T:Y:D:H::::N:::::::D:T::::::::::::::V:::::F::V: consensus HAYEGGDFIEG #oth .2.23211.11 HVO_1192 :E:VF::Y:TS Hbo0369 :Q:KY::Y:TS hla2180 :::::I::::: rrnAC2469 ::::SSG::::