4 genomes BUD2027 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0094 HVO_A0057 Hbo3693 - - hla2118 - -

Pairwise sequence scores
Consensus score	2058	rrnB0094	Hbo3693	HVO_A0057	hla2118
1769	rrnB0094	2061	984	1685	1670
1108	Hbo3693	984	1266	1093	1074
1953	HVO_A0057	1685	1093	2059	1851
1916	hla2118	1670	1074	1851	2060

273 symbols
consensus       MQALPKSRLLRFVEQAFHLARRAVARYSSKFSKQRYTLHQHIVLLCLKVRKNTTYRTLLD
#oth            .22....11...1.2.21..1.1.1..1....12....1..1.........1....1...
rrnB0094        :KV::::QI:::T:K:I:::::::S:::::::NH::::P::V::::::::::::::G:::
Hbo3693         ::T:::::::::::E::Q::Q::::::F:::::::::::::::::::::::D::::::::
HVO_A0057       ::::::::::::::::::::::T:::::::::::::::::::::::::::::::::::::
hla2118         :E::::::::::::::M::::::::::::::::R::::::::::::::::::::::::::

consensus       ELIEMPRIRSAIDLEELPTPSTLCKAFNRLDMAVWRVLLNLSVTLLPTNGVVGIDASGFD
#oth            .....1...1.12.2...2........2..1......2.1..11....1.11.1......
rrnB0094        :::::::::H:LG:S::::::::::::S:::::::::I:T::A:::::S:I::V::::::
Hbo3693         :::::L::::::N:T:::A::::::::G:::::::::V:::::S:::::::T::::::::
HVO_A0057       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
hla2118         ::::::::::::::::::S:::::::::::G:::::::::::::::::::::::::::::

consensus       RSHASKHYTKRTELTIQQLKVTLLVDTRVNAIIDLHVTTTRKHDSQIAPSLIKRNTDDVA
#oth            ...1.1.....11...........1.112..12...........1211111121122223
rrnB0094        :::::::::::A::::::::::::A:AK::::L::::::::::::::::::::::P::ID
Hbo3693         :::V:Q:::::::::::::::::::::KL::VF:::::::::::TRLR------------
HVO_A0057       ::::::::::::K:::::::::::::::A:::::::::::::::::::::::::::GE::
hla2118         ::::::::::::K::::::::::::::::::::::::::::::::K::::::R::::::T

consensus       ILLGDKGYDDQKIRALARDDGVRPLIKHREFSSLHKAWNARLDADIYGQRSQSETVNSRL
#oth            1111111111111131113321..211113221111111211112221111121111132
rrnB0094        ::::::::::::::R:::YHE:::::::::ST::::::::::::NL::::::::::::T:
Hbo3693         ----------------------::------------------------------------
HVO_A0057       :::::::::::::::::::E:::::::::K::::::::::::::::::::::::::::N:
hla2118         ::::::::::::::T:::E:::::V::::G:::::::::V::::::H:::::N::::::I

consensus       KRKYGAFVRSRRWWKQFRELTIACLVHNIDRAL
#oth            111113111112111111122331121131321
rrnB0094        ::::::::::::::::::::::::::::V::S:
Hbo3693         ---------------------------------
HVO_A0057       :::::N:::::Y:::::::I:MK:::::L:S::
hla2118         :::::E::::::::::::::VVG::T::::K::