|
Pairwise sequence scores | |||||
---|---|---|---|---|---|
Consensus score | 1951 | hla2529 | rrnAC2310 | HVO_1646 | Hbo3197 |
1230 | hla2529 | 1986 | 1015 | 914 | 901 |
1460 | rrnAC2310 | 1015 | 2084 | 1085 | 1080 |
1486 | HVO_1646 | 914 | 1085 | 2000 | 1302 |
1379 | Hbo3197 | 901 | 1080 | 1302 | 1851 |
284 symbols consensus MAASLI--ATVAFPLQSGLVPRGARAAVFESIFEVFLLLGTLVGVIVVAYMLYNAYKYRD #oth .3321122322222112.212111213..22.12...2..11..11.11.111111...2 hla2529 :ID:::::------::Q:SGW:-:Q:E::DE::F:::A::::::T:::::T:W:V::::: rrnAC2310 ::T:::TY:::V:::HG:D:R--:PS::::Q::::::::::A:::V::::TM:H:L:::: HVO_1646 :V:E:V::L:A::::::::::::T::F::::::::::::::::::V::G::::::::::S Hbo3197 :TIVT:VWVA::AII::::::::T::Y::Q::YD:::I::V::::::IG::::::::::A consensus DGG--NPH-DDVDRPELGELPTGGGG--GRKLFTSFGLSAIIVISLISWTYGTLLYVEEG #oth 11111223221211112..1.1.21.1111.1.2..32.111.1..1211.22..11.1. hla2529 ::S::E:K:E:F:A::V::::::Q::PKAK:::L:::::::V::::VVYA::I::::::: rrnAC2310 ::SGTD:YA:K:E:::M:::::::T::::::V:Y::SI:::::V:::A:::SQ:::I:Q: HVO_1646 GS::::G:I::G::LV:::::S:S::::::::::::FM:MV::V::V::::L:::::::: Hbo3197 G:::::A-:A:::::V:::I:::::::::K::::::I::M:::::::::::::::F:::: consensus PDP--EEALEIAVEGYQFGWRFEYPNGHTTDNVLRVPADRRVRLDVTSADVFHNFGVPEL #oth .22221132113.1..1...213....1.221211..1123.1.31113..2.1..22.. hla2529 ::ASD:DDI::T:T::::::EY::::::::R:EMI::::H::N:::::S::W:S::SS:: rrnAC2310 :::AQ::::::D::::R:::D:I::::::A-:T::::Q::V:::Q:::T:::::::I::: HVO_1646 :AD::D:S:DV:::::::::::T::::::::G::::::::P:::TIIT:::::::::T:: Hbo3197 :Q:::::TM:VR::::::::::V::::Y:Q:G:::::QNES:::V:::D::Y:::::::: consensus RVKSDAIPGQQTETWFTANE--------TGTYAAQCYELCGAGHSAMTADVVVMPPDEYE #oth .1.1..1..13122..2131111111112111312.1....1...3.22311.122..1. hla2529 :I:::::::DTS:V::SVSSEEVEAQGGEA:FRVE:F::::::::::KGQIT:L:E::W: rrnAC2310 :::T::V:::Y:SA::::::::::::::::::::K::::::S:::L::T::::::Q:::: HVO_1646 ::::::::::E:::::::D:::::::::P:::T::::::::::::Y:S:E::::L::::: Hbo3197 :::T::::::::D:::R:T:::::::::::N:S::::::::S:::F:::T::::E::::: consensus AWYENTEGDNATADNASAN-------SAGQPTAGDVAA------ #oth 2..22.22223232122.12222222232322323233211111 hla2529 E::::::::DSASG:E::-::::::::I:G::V:G:P::::::: rrnAC2310 :::NG:::SAGSG:QPA::GTATEST:L:T:::::::TTGGAPA HVO_1646 :::A::TA::::::::T::ESSADESV:A:SNLRPAVVP::::: Hbo3197 S:::S:Q-P:T:TE::::-:::::::------------::::::