4 genomes BUD2028 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2310 HVO_1646 Hbo3197 - - hla2529 - -

Pairwise sequence scores
Consensus score	1951	hla2529	rrnAC2310	HVO_1646	Hbo3197
1230	hla2529	1986	1015	914	901
1460	rrnAC2310	1015	2084	1085	1080
1486	HVO_1646	914	1085	2000	1302
1379	Hbo3197	901	1080	1302	1851

284 symbols
consensus       MAASLI--ATVAFPLQSGLVPRGARAAVFESIFEVFLLLGTLVGVIVVAYMLYNAYKYRD
#oth            .3321122322222112.212111213..22.12...2..11..11.11.111111...2
hla2529         :ID:::::------::Q:SGW:-:Q:E::DE::F:::A::::::T:::::T:W:V:::::
rrnAC2310       ::T:::TY:::V:::HG:D:R--:PS::::Q::::::::::A:::V::::TM:H:L::::
HVO_1646        :V:E:V::L:A::::::::::::T::F::::::::::::::::::V::G::::::::::S
Hbo3197         :TIVT:VWVA::AII::::::::T::Y::Q::YD:::I::V::::::IG::::::::::A

consensus       DGG--NPH-DDVDRPELGELPTGGGG--GRKLFTSFGLSAIIVISLISWTYGTLLYVEEG
#oth            11111223221211112..1.1.21.1111.1.2..32.111.1..1211.22..11.1.
hla2529         ::S::E:K:E:F:A::V::::::Q::PKAK:::L:::::::V::::VVYA::I:::::::
rrnAC2310       ::SGTD:YA:K:E:::M:::::::T::::::V:Y::SI:::::V:::A:::SQ:::I:Q:
HVO_1646        GS::::G:I::G::LV:::::S:S::::::::::::FM:MV::V::V::::L::::::::
Hbo3197         G:::::A-:A:::::V:::I:::::::::K::::::I::M:::::::::::::::F::::

consensus       PDP--EEALEIAVEGYQFGWRFEYPNGHTTDNVLRVPADRRVRLDVTSADVFHNFGVPEL
#oth            .22221132113.1..1...213....1.221211..1123.1.31113..2.1..22..
hla2529         ::ASD:DDI::T:T::::::EY::::::::R:EMI::::H::N:::::S::W:S::SS::
rrnAC2310       :::AQ::::::D::::R:::D:I::::::A-:T::::Q::V:::Q:::T:::::::I:::
HVO_1646        :AD::D:S:DV:::::::::::T::::::::G::::::::P:::TIIT:::::::::T::
Hbo3197         :Q:::::TM:VR::::::::::V::::Y:Q:G:::::QNES:::V:::D::Y::::::::

consensus       RVKSDAIPGQQTETWFTANE--------TGTYAAQCYELCGAGHSAMTADVVVMPPDEYE
#oth            .1.1..1..13122..2131111111112111312.1....1...3.22311.122..1.
hla2529         :I:::::::DTS:V::SVSSEEVEAQGGEA:FRVE:F::::::::::KGQIT:L:E::W:
rrnAC2310       :::T::V:::Y:SA::::::::::::::::::::K::::::S:::L::T::::::Q::::
HVO_1646        ::::::::::E:::::::D:::::::::P:::T::::::::::::Y:S:E::::L:::::
Hbo3197         :::T::::::::D:::R:T:::::::::::N:S::::::::S:::F:::T::::E:::::

consensus       AWYENTEGDNATADNASAN-------SAGQPTAGDVAA------
#oth            2..22.22223232122.12222222232322323233211111
hla2529         E::::::::DSASG:E::-::::::::I:G::V:G:P:::::::
rrnAC2310       :::NG:::SAGSG:QPA::GTATEST:L:T:::::::TTGGAPA
HVO_1646        :::A::TA::::::::T::ESSADESV:A:SNLRPAVVP:::::
Hbo3197         S:::S:Q-P:T:TE::::-:::::::------------::::::