4 genomes BUD2042 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2938 HVO_0456 - Hmu2897 - hla0668 - -

Pairwise sequence scores
Consensus score	1039	rrnAC2938	hla0668	HVO_0456	Hmu2897
733	rrnAC2938	1026	486	507	576
711	hla0668	486	1048	510	542
700	HVO_0456	507	510	1047	564
787	Hmu2897	576	542	564	1035

133 symbols
consensus       -MDRRANYALVEIQEHLGPDPDALDVPWAEFAGDESDLHTFDVPTADPADPYVEMQVFDV
#oth            1233111..2133221.112222.112..22311212322.211.311311.222.11..
rrnAC2938       ::S:::::::C:F:Q::::AA:S:::::::YT:NST:PVS:NI::SSS::::::::::::
hla0668         ::PPHTD::::TVL::::E:::::N:E::::V::A:T::::E:T:T::L:A:F:V::Y::
HVO_0456        :VHH:::::T:F:GS::H:EGET::LD::DD::::TETFE:::::D::RE::LGI:A:::
Hmu2897         MT:Y:::::M:SL::Q:::::N:::::::T:SA::::V::::::::::VE:::Q:::Y::

consensus       GDFGHEIRINGEPLSGFDIPPGDGWQLWMDTITGARLREGENTIQFVRDTESDDAFAVGT
#oth            1312..231..21.1...11122...1.1..11212.32.1..2122.12222.2.11.2
rrnAC2938       E::N:::VV::::::::::A:DE:::::::::APE::HL:::::::R:N:D:K:::V::S
hla0668         :T::::VHV:::::T:::L::S:::::::::::::M:QQ::::V:I:::G::::E::I:N
HVO_0456        :EY::::::::D::::::::::::::Y:V::V:::S:V::T:::RV:::D:GN:::::::
Hmu2897         :SYD::LL:::QA:::::L:T:Q:::Y::::V:S:::::::::L::Q:::TT::S:V:::

consensus       VTVHWKEPVE---
#oth            11.1.21112211
rrnAC2938       :::::T:::::::
hla0668         :V:::RSESSPER
HVO_0456        ::::::::::E::
Hmu2897         L::N:::::D:::