| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||
|---|---|---|---|---|---|---|
| Consensus score | 5671 | hla2348 | Hbo0064 | rrnAC0766 | Hmu3165 | rrnAC0761 |
| 2029 | hla2348 | 4920 | 1552 | 1711 | 1701 | 1764 |
| 3619 | Hbo0064 | 1552 | 5371 | 2977 | 3174 | 3196 |
| 4447 | rrnAC0766 | 1711 | 2977 | 6841 | 4504 | 3845 |
| 4745 | Hmu3165 | 1701 | 3174 | 4504 | 6827 | 4066 |
| 4630 | rrnAC0761 | 1764 | 3196 | 3845 | 4066 | 5623 |
935 symbols consensus -MVDFTRRQVLSSSVAAALGASVAGVASGDEVAEGDTPGAPQVKGSLKRFSTTAFGAEVT #oth 122322113221311.1.111111.211121131221212241313.2..1..21...1. hla2348 MPNNY:::T:V::LA:L:AASQT::SVA:K:-:::QGH:IE:EGAT:N::A::II:::I: Hbo0064 :::E::::KLMAT::::::::::::T:AAE---D::::H::M:::E:T::A::::::::: rrnAC0766 ::::::::::::Q::::::::::I:::::E::E:T::::::S:A:::::::::::::::: Hmu3165 :---------MA::::::::::::::::::::G:S::::::G:N:::::::::S:::::: rrnAC0761 :::::S::::::K::::::::::I::::::::::SE:V:SGT:::D:::::::::::::: consensus GPFVFQDGSLLYSLQHPE-------------RANPAPFDRAGI-GYFSGFQFEL------ #oth .1.1112.312112...3111111111111142.2211222111.112.13123111111 hla2348 :M:ITE::RFFFNV:::D:::::::::::::-::LDGE:EP::L:AVT:VDMNQLPRDFQ Hbo0064 ::::T:S:T:IF:::::S::::::::::::::Q:::::NTG:::::VK::S:--:::::: rrnAC0766 :::::E:::::::::::::::::::::::::GE::E::G::AV::::::::::F:::::: Hmu3165 :::::::::::::N:::ATGDRGGDFENSDVK::E:::::::V:::::::T::::::::: rrnAC0761 ::::::N:A::::::::::::::::::::::EE::E:::T:::::::::::::::::::: consensus -----DGDNDDFSELGIPNTEEEQRRVRSAAGEYERLAQGRDEIQDGEERLGVPQTPDGT #oth 111112.21..2213131412321321.224.1.24.12211213111111.222..1.2 hla2348 SVQIPE::D::Y:DD:DGVP:PYDQ:::T:L:D:Q:::T:G::TD::::-::SVY::E:D Hbo0064 :::::-::D::VQ:I:::::K:K:SK::VGN:::VL:::EG:N:G:D:D-::I:T::::V rrnAC0766 :::::::S::::::V:::D:::K::Q::::::D::V:I:::E:::G:::::::::::::V Hmu3165 :::::::::::::::SV:S:VD::G:I::SE:::VF::HA:E:::G:D::F::V:::::: rrnAC0761 :::::::T::::D::ST:Q::A:::Q:::GD::::I::H:::K:N::::::::T:::::: consensus DITQ--FAGTQYGAAGTNPDCNQFVPTNEDGTEGYLFTNWENSPGNVTRVPISQD-EDGE #oth 311311241231233231..2.11111211111.1.1..1.22..221.312312123.2 hla2348 SL:-::--------GQI:::F:GY::SS:EPD:::::::::HR::AM:::HLQ:NGRN:T Hbo0064 N:S::::D::R:SDF:YT::M:::::::::::K:V::::F:A:::::::M::E::::::G rrnAC0766 :L:A::LN:SS-:GY:Q::::::::A:DDE::::::::::::Y::CIS:::::::::S:: Hmu3165 E:::DN:::::::::A::::::::I:::D:::::::Y::::::::::::L:V:RT::E:: rrnAC0761 :::LDN:E:::::::::::::::::::D:::::::::::::::::::S:I:LR:T:F::: consensus WEADL--DNALNLANTEPFREIGGTRINCYGDRSPWGTMLSSEENYAHPRVSLTATVGDI #oth .3113112322122.11221221..11..1.12...2.1111..1.11112231422211 hla2348 :RV--::---:GME:LD-:SAVE::WV::F:TV:::::P:T:::::SI:----------- Hbo0064 :T::R::E:TT::::::AM::L::::::::::::::::P::A::E:::::LAG:::TS:: rrnAC0766 :S::VGS:MT::VV::::::D::::WV:::::L:::E::I:A::::S:::::Y:H::::: Hmu3165 :::::::E::T:::::::L::L::::::::::::::N:::::::::::T:::::G::::: rrnAC0761 ::::::::D:I:::::::::::::::::::::L::::::I::::::::::::::NQ:::: consensus VDAGTGKGRIGGAQFWNRPNPTEIQSA-DDYY--G--DDAWQIQGYWALAGVEFLAYYLG #oth 332121214312321..1.1132222232222112223242431.22222.1.32.11.. hla2348 -----------DTPV::N:D-------:----::-::---::YK:-----:::R::RH:: Hbo0064 M:::S:V:YR:AS::::::::::VG:S:-EW:::DEYN:GVYP::AF::::L:LH::::: rrnAC0766 :ES:::V:K:::C::::::::S::GE:LG::VEA:DIEEEFT:::::SQ::::KA::::: Hmu3165 EA::::::LV:::A:::::::VG::::I:::::::::::S:FV::::::D:::::::::: rrnAC0761 :::::::::::::::::::::::::::V::::::::::E::S:::::::D:::::::::: consensus AEQVDQT-D---N-TTPIGDTYPNPYRYGYHVDFREPAAEEPQPVKYYVMGRAAWEAPDV #oth 2132212323111333213.21..1..1..2.1211.2222.4.3.1112..221.1121 hla2348 H:RN:D-:-:::-:-GIFA:KF::::::::I:ELK::ES:::I:E:RFAL::STH:NAV: Hbo0064 :DP:GD-:-:::-:E:::::::::V::T::I::::K:EWA::K::::::F:::::::::: rrnAC0766 :DT::::E:G:::DM:L:D:V:::::::::F::I::::::T:S:M::::::::::::::I Hmu3165 :::::::G:NEN:T:N::::V:::::::::::::::::::T:E:I:::::::T::::::: rrnAC0761 S::SY:NSNS:::S:E::S::::::::::::::::::T:DP::::::::::::S::::NI consensus QPDERTVYGCSDGDSKGIYKFVADEPIPSYDNPMDVAGTLYAPKITNDAA-AADAGQRKS #oth 23.12.1.31...121.2.......211312221122.....1.2.13213223224232 hla2348 M:::K:A:TT:::TAR:F:::::::K------GDLSS:::::A:A:Q---:--KGPLGGD Hbo0064 :S::K:::LT::::T::L:::::::::::::D::::::::::A:V::E--:--::AKN:P rrnAC0766 :G:Q::::::::::::::::::::::::E:::TD:I::::::::::::::N::E::::N: Hmu3165 L:::::::::::::::::::::::::::::E:::::E:::::::::::::SV::G:E:D: rrnAC0761 :A::Q:::M::::::::::::::::R::K::D::::S::::::::::PQ:D:STV:T::: consensus PAAVSLEIEWIELGHASNAEIEEWIAEYDDVTQADYLEAHAETDWDE-----DREAALEE #oth .14221211.21.11.113.212.......1..31.234122322411111124331231 hla2348 :DK::FG::::::::::DE:::K:::::::I:::::----------::::::-------- Hbo0064 ::N:D::LD:LP:S::T:R:VAS::::::::::V::::T::::::Q:::::::F::::A: rrnAC0766 ::QTP:::::M:::::T:G:AA::::::::::::::ITE:T:YSV::IGTDVSVSD:VR: Hmu3165 ::::::::::L:::::::::::S::::::::::EE::::::::::TD::::::LAT:::: rrnAC0761 ::EY::D::::P::S:::::::::::::::I::S:::RV::GS::M:::::::::::::: consensus ADKAVAE--NGNQNYITNEEIVEWADQYEANGPDGV--DEELRRVPFLETRAAAKEIGAT #oth 1133143112.1121.1221121..3222332133111.1211111..11.1..122.11 hla2348 -------::D:ENS::SEG:MD:::AG---------:::ADDD::A::QC:Q::MRK::: Hbo0064 ::::::K::::::DF::D:::QA::NKW-TDD:NA:VD::S::K:::::::::::A:::: rrnAC0766 ::LT:LQSAS:::S:::::D:::::E::::::::::::::::::I::::::::::::::: Hmu3165 :::::V:::D::::::::D::::::::::Q:::EN::::::::::::::::::::::::S rrnAC0761 ::RE:I::::::::::::::::::::::Y:E:::::::::::::::::::::::::V:VS consensus IEFNKAEGVDSRDGAQPG-DFIYFGISEFNDDLADDEGDIQMDRVDGGVVYRGVLESDYN #oth 2..1.2..122222231.1.22.211112.2312112..21111111.2...231.2..1 hla2348 T::R:M::INI:R::EA:E:YM:VAM:NT:RTMG:::::::LNGDEW:A:::MP:::::D Hbo0064 V::R:S::I::VED::::::Y::L::::L:GGMS:QH::LR:::::::L:::AEI:A::: rrnAC0766 ::::::::::TV:NS:::::::::::::::::::N:T::::::::::::::::::::::: Hmu3165 :::::::::S::E:VS:::::V::::A::::A:::::::V:::::::::::::Q::R::: rrnAC0761 :::::::::::K:::G::::PV::::::::::::N::::::::::::::::::::::::: consensus ISTLEPVIVG-PDFTDEAEDANDALRNIDNVYVMDDGRVLCCEDG--FGGPARSYPNDGL #oth 1.11..111.111121223212.122.21112212.11111.11211.111211111112 hla2348 ::EM::IVT:G:EANICGGCPY::NP:AN------:KACQS:A--:::N-:TKDDEDQ:R Hbo0064 :::::::::::S:AS:P:DV:::SVL:::::F::::::::::::ADK::---::::::CM rrnAC0766 V:::::::T::::::::P::::::::::::::T:R::::::::::::::::::::::::: Hmu3165 V:::::::::::::::P:A::D:::::::::::::::::::::::::::::::::::::: rrnAC0761 :::::::::::::::::P:::D:::::V:::::::::::::::::::::::::::::::: consensus YVYQPD--------------TGTV-LT-S-AP-GF-G---TV---EPE------------ #oth 121313222212221122212112312323223123233322333312212122121111 hla2348 L-----::::::::::::::K::MN:AK:M:MS:QTSLDVENTIA::D:::::::::::: Hbo0064 :L:T::::::::::::::::----:--:-:--:--:-:::--:::---:::::::::::: rrnAC0766 :::::TVTVSANSAAVGSGS::::S::A:SL:A::S:ARL::NVSN::IASITGVSFPDA Hmu3165 ::::::AILDASAVAVSPES::::D::MNA::G::A:GEF::SLTD::VAAISDVTFPDA rrnAC0761 :::E:Q::::::::::::::----:--:-:--:--:-:::--:::::::::::::::::: consensus ------------------------------------------------------------ #oth 211222112111111111121222221212211211222122222111112112122111 hla2348 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0064 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0766 LGLTESSVSDDGSSATIRVADVNTNVQSGARDVSLATLDVRANGGGTTDLTVSIEQMDDE Hmu3165 IGLQKVSVADDGSSATIRVGDIERSIQPGSLDVTLAGVEVTGSAPGTTDLAVSVETIDDE rrnAC0761 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -------ETRNG--NGGPQADGGGANGEDNDNDGHEEDN-----NGNGR-D--------- #oth 212212322121213413443133231322232.33124111112.12332121122112 hla2348 :::::::-----:::IVVMD::RVVI:::TG:R:::NNMIWVFDP:SA-:-::::::::: Hbo0064 :::::::-----::EL:AIG::DRN::HG::A::DD:G::::::P::SE:-::::::::: rrnAC0766 NGNAIEA:A:::IVV::::TVV:D:APT:P:G:::F::L::::::::::L:YEDVQVLFS Hmu3165 AGVEIGV:::R:LVIT::P:A::::VP::P:S::RY::V::::::::::V:YDDVVLLFE rrnAC0761 ::::::EK:::::::S:NGNS:N:N::NE:S:N:N:NGH:::::S:::SNS::::::::: consensus ----------------------------------- #oth 22111212112211111211221121122111121 hla2348 ::::::::::::::::::::::::::::::::::: Hbo0064 ::::::::::::::::::::::::::::::::::: rrnAC0766 NMDSDSVQLNTGAYDFNENGKLDFADVTALYEEVN Hmu3165 TIDSDAVRLNPEAYDFNDNGQIDFDDVVELYEEI: rrnAC0761 :::::::::::::::::::::::::::::::::::