|
Pairwise sequence scores | |||||
---|---|---|---|---|---|
Consensus score | 5325 | Hbo3739 | hla0496 | Hmu2427 | rrnAC3254 |
3836 | Hbo3739 | 5607 | 2906 | 3192 | 3312 |
3961 | hla0496 | 2906 | 5740 | 3035 | 3419 |
3969 | Hmu2427 | 3192 | 3035 | 5184 | 3421 |
4455 | rrnAC3254 | 3312 | 3419 | 3421 | 5555 |
808 symbols consensus ----VTDRAS----R--------------------RSD-------DGLARRAVLAAVAGA #oth 1111112311222212211111111111111122211122222222213..22.212.22 Hbo3739 :::::::GG:::::-::::::::::::::::::::---:::::::-E:T::RL:::::S: hla0496 ::::::::::PGND:SDIDDDRSDIDDDRSDIDDD:::IDDDRPES:V:::T::G:L::: Hmu2427 ::::::EY::::::-::::::::::::::::::::---::::::::L:D:::F:::T:AV rrnAC3254 MVYGIIGFGDSDGS:CP:::::::::::::::TTH:::EGPMTDR:::S:::::QT:::T consensus GAAAVAGCSALESEEDAATTTVDEERARELAERFAPTLYFDSAEPWFPTDPRPYESERDG #oth 13111....13.22311112212322121..2.1..1.1..21.2.........111311 Hbo3739 S:::::::::T:::PN:T::A:PTDE::T::::Y::V::::AN:R::::::::::::S:: hla0496 :S::L::::GS:PD-::::D:L:P:TLD:::T::::::F:::::::::::::::TV:E:D Hmu2427 :TS:::::::::AG:::T::P:::G:::::::::::::::::::Q:::::::::::D:E: rrnAC3254 :L:S::::::F:::S:D:AS::EG:::A:::R:::::::::R::::::::::::T::Q:: consensus ETVVDGFDALDGYHERAAEAE-PPDPTVFYNVVQYEDSPLAVVQFWFYSAFDQFTTNFHW #oth 11..1..1.11..2..3322221.1..1.1.113.12...1...1.2........1.... Hbo3739 :P::E::::::::S:::T:TP:V:::::::::RS::E:::T:::Y::::::::::::::: hla0496 :::::::V:F::::::YD::GE::N::::::G::::::::::::::L::::::::A:::: Hmu2427 :::::::::::::T::FRA::T:::::::H:::T:D::::::::Y:A::::::::::::: rrnAC3254 D::::::::FN:::::M:DG:::::::A:::::E::N::::::::::::::::::::::: consensus HDWEVLHVFVDTDTDDPQLYVASSHSRSVPNNEFLDPDPEAVPRILSELGSHSSALSVNE #oth .....1...1.1221212.2.......2.....1...21231..1.1.......1..1.1 Hbo3739 :::::V:::I::ER:SAR:H:::::::R:::::H:::M-:E::::::::::::::::L:: hla0496 :::::::::::L::G::::::::::::::::::::::N:D:I::V:::::::::T::::: Hmu2427 :::::::::::::S:E:A:F::::::::::::::::::-RT:::::Q::::::::::::: rrnAC3254 ::::::::::::G:G::::::::::::K::::::::::::M::::::::::::::::::D consensus ERDRFQRLPEGDRIADITNRAIDTVEDLANIPVAYGLPRDEGSRLPFVVPELDGAPLYEH #oth 2122.1.1221133.....22122211.231.2.........2...11...11.2.1.1. Hbo3739 ::ES:::VSV::IS::::::::RGLSS:E:V:A:::::::::F:::::::::::K:V::: hla0496 NPGQ:::VG:EGLL:::::TT:::::::LG::I:::::::::M::::::::YE:E:::D: Hmu2427 :::::::::T:GD:::::::VV:D::S::S::::::::::::::::Y::::::::::::: rrnAC3254 V::::T:::::::F:::::S:VE:I::::E::::::::::::::::YL:::YE::::::: consensus ERLPSVSREDLVPEALTIRSFDSLTSPPTDLPERETGLAFRHEDRNDP----EGDEDIAY #oth 21..1.2212.1222..1..1.2.22..1...3....1113121.2.2111132.2223. Hbo3739 ::::A:T:DT::::::::::::D:::::::::G::::::LDF:G::::::::::::T--: hla0496 PD:::::V:S::DG::::::L:A:G:::::::F::::I::::A::E:ELADRTA::V:G: Hmu2427 D:::::EP:::::DE::V::::::SA::::::::::::V:EF:G::::::::GT:A:V:: rrnAC3254 :::::::::::IS:P::V:::::::E::S:::T:::::V:Q:T::G:-::::-::P::E: consensus DLVPSAELEHITAFTGPQLSFEFAVPEFAEDAVAGHITTTGAPWNQPRYENPAADISEPN #oth 1.122212.1122...1...1..2.1121...111.1...12..2.1..11..1.11211 Hbo3739 E:::AT:V::L:::::T::::::N:TQ:::::I:::L:::D:::T:E:::D:::::T::A hla0496 :::Q:::::D::::::::::Y::::::IV:::::S::::::I::K::::::::L:VTAG: Hmu2427 E:RST:DI:::SG::::::::::S:::AV::::::::::::E:::::::Q:::::::D:: rrnAC3254 :::::S:::::AD::::::::::::::::::::S:::::::::::::::::::::::::: consensus HRAALAERYDAI--------GAPAEVRAVVAAVSEAVENDDAPDNEGLTTEDSAVESVAL #oth ..11...1.1..11111111.11122321.121121.2311..11..1..21231.111. Hbo3739 :::::::Q:::::::::::::::GS:GS:::::T:::TT::::E::::::QT:N::A::: hla0496 :::E::::::::AAEESFGD::T::LD::::R:TR:::S::::EG:::::T:AIT::FV: Hmu2427 ::RE:::::A:::::::::::E::P:N:::T:::SL::DGE:::G::V:::::::::::: rrnAC3254 :::::::::::::::::::::::::I:TI::SL::::S::::::::::::::TT:::::: consensus LESDPEAVPTFGG-VAVAQDVPAGEHRLTVNGAGVAPHSEQLSV---SEDE--------- #oth 1....1.....2.12.1221112.2..1...1..21.1.1322.2222121111111111 Hbo3739 ::::::::::::::::LLR:::P::::::::R::A::Y:Q::::SDAT:N:TATNNATET hla0496 I::::::::::::GI:::NGI:E:D:::::::::Q:::::E:A:::::A::::::::::: Hmu2427 :::::S:::::R:::::::G:D::Q::::::::::E::::SIT::::-::R::::::::: rrnAC3254 :::::::::::S::L::V:::::::::F::::::::::::TV::PET::A:::::::::: consensus --------------------------GVTAAGVDGEIPLVARENATKLEVDPAESDADLT #oth 111111111111111111111111111213......1...1111.11121122121322. Hbo3739 ETAAGGTDDATAEETESENEADQTPP::AV:::::::::::SGD:V::R::ADGT::T:: hla0496 ::::::::::::::::::::::::::PL:T:::::::::::::::::V:LSD::::I:M: Hmu2427 ::::::::::::::::::::::::::::::::::::::::T::D:::VT:::T::ETEV: rrnAC3254 :::::::::::::::::::::::::::P:R::::::V:::::::::R::::::GA:S::: consensus DLAVEDDFAGRLYDAPVAGPDAVYVHRGGAYTTEVRDADDEIGAFRVNPAPEAAGA---- #oth 13.1....1..1..111311......2.....1.1..3..11..2.11.22.23322211 Hbo3739 :V::::::::::::S::N:S:::::::::::::::::T::A:::::::::E:PSVT:::: hla0496 RT:::::::::I::SA:D:S::::::A:::::::::::::::::Y:IK:::::::SGEPI Hmu2427 :F:L::::G::::::::E::::::::::::::G:I::S:::L::V::::TD:DRI::::: rrnAC3254 ::::::::::::::::L:E:::::::G::::::::::R:::::::::::D:::DT:AT:: consensus -IDRPRTGKASLASFLADIAEETRAEVAE-------GADDDGDDDDDDGSSG--S--SEG #oth 1111.2..11...1.1.1111..122132111111123132.232222222122122231 Hbo3739 ::::::::::::::::::VTR::ATT:Q:AAEGTDG:G:KN:SGG:KNE:G:DD:GTGG: hla0496 R::::E::A::::G:V::V:::::::::A:::::::V:AES::::S::::::GG:DG::: Hmu2427 :VE::T:::E:::::::T:T::::::I-:::::::::L:L::----------::-::--- rrnAC3254 :::E::::::::::::::::::::QS:LD:::::::EM:::::S:::::T::::-:::S: consensus GSANAIQGLERALAAAVAAAERAAERAEAGDREGADRQLEAVADRLARVADRLEAASDGL #oth 222..11..211.1.3231.2..21..231.2211112.2113222312221112.211. Hbo3739 P:::::H::TKS:E:IA:::D:::::::SN:AP:::KA:::AT:N:Q:AK:::::::::: hla0496 :PS:::H::::::::::DN::::E:::RE::K::TN::::N:LE:I::IQE::A::RE:: Hmu2427 -R:::V:::V:::E:TGS::Q:::R::AD::::::::R:V::QSGFEQ:::N::R:A::: rrnAC3254 ::G::::::::::::V:E:::::T::::::::GN::K::Q::::::R:::T:I:D:::A: consensus PDPLANAARRRLEQATRRVEQAQAAEKL #oth 111221.211.12..21.21..1211.. Hbo3739 :::A:::::N::D:::::S:::L::::: hla0496 SPG::::TD::I:::::::K:::ES::: Hmu2427 :::IER:VD:::S::RK:::::LD:::: rrnAC3254 S:::S::::::::::D::T::::::D::