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4 genomes BUD2059 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3397

-

Hbo2397

-

Hut2078

hla0482

- -

Pairwise sequence scores
Consensus score2057 Hbo2397 rrnAC3397 Hut2078 hla0482
1200Hbo2397 2063 751 782 776
1257rrnAC3397 751 2214 974 787
1390Hut2078 782 974 2069 998
1399hla0482 776 787 998 2196

314 symbols
consensus       --------------M---RVLSFNVRYDNADDGEDAWPHRRDAVARLIRFHRPDVVGLQE
#oth            11111111111111122211111....1132.1312.22..221321111.2..1222..
Hbo2397         ::::::::::::::-:::-:::::::::TD:::P::::::::DAV::V:Y::::::C:::
rrnAC3397       MNVKPYPDGCQRTH:KPT::M:::::::T:G::V:G:::::RL::GT:QY:N::II:V::
Hut2078         ::::::::::::::-:::--MTY::::::PE:::HR:AN::E::SST::::A::::::::
hla0482         :::::::::::::::TAI::::Y::::A:R::HH:::HD:::::G::V:::::::AAF::

consensus       PLAHQLRDLRDRLDEYEWVGRGREAGDAA--------------GEHTPIGYRADRFECVD
#oth            1131.1222222.221.11131.23222311111111111111..121111112.22321
Hbo2397         ::K:::DAF::G:::::::AVP:TG:N::DATDSKETDDAAST::SV:V::D:S::SLE:
rrnAC3397       AM:::::E:EVL::G:::::DP::SV::G::::::::::::::::::A:::::E::D:AA
Hut2078         ::D:::A:VA:::PSF::I:S::VD:ESE:::::::::::::::::::::::T::I:Y::
hla0482         ::PG:R::::E::S:::F:::::::D:E-::::::::::::::::SC::AV:T::W:V::

consensus       DDTFWLSETPEEPGSVGWDAAYPRIATWARLRDRDGDATLLVANTHLDHDGARARREGAR
#oth            32......2.2..2.11.1.31..12.1.1112221122112211.1112123..21113
Hbo2397         SE::::::::::::::::::TL:::L:R:T:QGES:E-:FH::SV:::N::VK::L:::K
rrnAC3397       TN::::::Q:A::S::::::::::V::::::::::T:DD::CL::::::Q::D::V::IE
Hut2078         G:::::::A:::::::::::R::::V::::::::RT:::::F::::FS:::P::::KS:H
hla0482         ::::::::::S::-:TD:G:D:::::::::V:AI::::A:::V:::F::VS:H::::S::

consensus       LLLDRLADLAGDA--------PVVLAGDFNCTAGEDPYEILTGDD-------AP---SG-
#oth            .2211.222322311111111.1113..1.113112111222132111111131222212
Hbo2397         :AR::::Q:D:--::::::::::I::::C:A:PDS::::AV:E--:::::::--:::--:
rrnAC3397       :V::H:DSATR:::::::::::A:VM:::::VV::PA::RAE:HE:::::::L::::D:R
Hut2078         :::::::::RD:E::::::::::::T:::::V:::E:::::::E::::::::S:LAL:::
hla0482         ::CQ::P:V::PDAGESDETI::::V::::::S:S::HR::V:::PTAETDT::IDD::I

consensus       ALADARRAADHAH-GPETSRTDFARLDPNRRIDHVFVSPDVAVRTRATLADRDDDGRYPS
#oth            22312233.333.1..211311.33131322..11112211313231122.12121111.
Hbo2397         :F::::HV:K:G:H:::KTMHH:TG-::TE:::Y:::R-ECD::LS::::::TRE:-:::
rrnAC3397       R:V:T:NT:TVT::::T::::::HD:L:EMG:::::::E::::D:::VI::::::H-:G:
Hut2078         ---EQE:S:EP:::::P::V:::EN:V:::K:::::TT:::T:G:HGVCS:VY::::F::
hla0482         ::R::AT:::LR:::::::L::::::IDG:::::AL:::E:GAEAF:::T::::R:::::

consensus       DHLPVLADLAL---
#oth            ..1..112231211
Hbo2397         ::F::V::VL:R::
rrnAC3397       :::::VV:CEP:::
Hut2078         ::::::VE:GPGEG
hla0482         :::::::R::::::