Home |  Text search
4 genomes BUD2069 4 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
- -

HVO_1065

Hbo0564

 -

Hut1256

hla0052

 - -

Pairwise sequence scores
Consensus score1506 hla0052 Hut1256 HVO_1065 Hbo0564
1003hla0052 1683 775 832 765
1052Hut1256 775 1497 847 855
1218HVO_1065 832 847 1536 1040
1138Hbo0564 765 855 1040 1434 

219 symbols
consensus       MTRRWPVAGLLLAILWLFVRGVELAPRPLAEEFIIGLAVGMPIAFLFRRFYADNAAIGRS
#oth            22.1..13.22211..2..2.1111.32.212212..2..121.121.11.323332212
hla0052         V::T:::::V:FG:::V::Q:PP:::E::VGSLL::::::F:T::V:::L:E::MELR::
Hut1256         -M:::::I:AA::V:::::N:::P::M:::GAALS:::::::::Y:::::::SKI:::GL
HVO_1065        :S:::::S::VM:V::::::::::T:QR:L:::::::G:::G:::F:::::G:E:P:A::
Hbo0564         ::::::LT::::::::I:::::::T::T::::::V::I:::I::Y:L:G::TPTLGP::A

consensus       LRVAPYAALYLLTFLRELITANVDVAYRVLAPSMPIEPAVIEIPLRVRTDLAITTIANSI
#oth            .122.1231.122.13.121.12..12.1.11.1.12.2.111....111111.......
hla0052         ::GV::VL::V:::I::A:V:SL::T:::::L:S:S::E::L:::::::::GV:::::::
Hut1256         ::SI:ATVI::VL::T:::::::::::::::::::::::::::::::ES:A:::::::::
HVO_1065        :::::::::::A:::W::L:::::::V:T:S:::::D:::V:V::::::P::::::::::
Hbo0564         :K:::::T::::V::K::V:::W:::K:::::::::N:R:::V:::::::::V:::::::

consensus       TLTPGTLTMDYDAETNSLYVHSIDGSDRDAILAPIRRWEDYALVIFDEELKPGDPAPD--
#oth            11...1..11..312.2..1.2.1.11113213...3..2...2.....11.2..1.111
hla0052         :M:::S::LN::P:E:A::I:V:::::PKD:VD:::N::N:::I::::::S:S:::::FA
Hut1256         S:::::::::::GDR::::::A:A:RE::LVV::::Q::G:::R:::::RS:T::V::::
HVO_1065        ::::::::::::D::::::::::::::P:G::K::::::::::::::::::::::::Q::
Hbo0564         ::::::::::::::::T:::::::::::::L:E:::T::::::::::::::::::V:Q::

consensus       ---------------PE-G-ADEEDAPAA-ADGGERDGR
#oth            11111111111111121212223323133211..13213
hla0052         VYPPDRTHPALKQAA::T:EET:T:P:TEE:T::D::D:
Hut1256         ::::::::::::::::D:-:::T:ET:NGDT::::S::K
HVO_1065        :::::::::::::::V:G:P::GG:::::::T:::QH:-
Hbo0564         :::::::::::::::L::-:---------:T::::ER:D