4 genomes BUD2073 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0114 - - Hmu1229 Hut1358 hla1695 - -

Pairwise sequence scores
Consensus score	1407	hla1695	Hut1358	rrnAC0114	Hmu1229
691	hla1695	1553	468	459	449
845	Hut1358	468	1359	541	601
943	rrnAC0114	459	541	1452	826
1004	Hmu1229	449	601	826	1455

211 symbols
consensus       ---MNGNTTVREVMRREFVGVSESDGLLEAAELLRRERADCAVVLRGNEPVGVVSDRDVL
#oth            111.123111.1..3.111.1....2121132..31.322321....2....22121.1.
hla1695         ::::RTD::A:D::H:::L::::::P:RD::A::VD:GTN:L:::::G::::RL:W::A:
Hut1358         ::::::S:N:::::::DY:::::::::V::GR:::D::::G:::::::::::T::SE:::
rrnAC0114       MTH:::EV::::::N::Y::A::::D:::TT:::I::DQHPIL::::::::::AT:::::
Hmu1229         :::::E:V::::::E:::::::::::V::TS:::L::E::L::::::S::::::T:::::

consensus       AALLDAG--DPEAATVEDVMRESVPTIAPDDALPAARDRLASRSVSRLVVLDD-GEPAGV
#oth            232123111.1332..211.3222.113212312312111323122311132211.21.2
hla1695         G::::::AG:EHDL:::S::GPPL::VT:::::AVVEE::IAEG:D:V:AVE::::AL::
Hut1358         DQM:EVE::::T:E::S:A:ESM::R:DV::HVES:A:Q:L:N:::L:::::ERD:V:::
rrnAC0114       :YIV:G::::::T:::G::::::I:::G::AG:::::::M:T::AEF:L:TA:::::L:T
Hmu1229         :H:VSD:::::SG:::::::T:::::V:AEET::E::::MS:W:T:W:::S:G::::::I

consensus       VTEHDILATAALRSEA------TADGANGQPAR---A--VAAAGAEATAE--QSAADAGF
#oth            2.22.2122311322211111123322322122222122223313211322122332322
hla1695         ::AS:V::VG:P:TGNGAHDPLSDE::T:D:R:GDA:MMGSDG:VDPAV:A:S:TDTS:S
Hut1358         I:KD:LVRSV::NRD:::::::QP::S:LE::::::-::-----T:::N:::---T:::Y
rrnAC0114       L::::::S::R:E::S:::::::--DVVE::SP:::-::::TT:Q:::TDGM::::EDS:
Hmu1229         :::::::::S::G:::::::::::QE:M::T:SQTV:DE::::::T:::G:::TIP:EP:

consensus       DNQGICEACGALTRNLASFNGQLLCADCRDV
#oth            23..1.13.121221.221...11.31..11
hla1695         RT::V::S::::VPD:VTA:::AV:PE::E:
Hut1358         S::::::R:::::SD:I::::::::T:::::
rrnAC0114       :S::::S::STF:::::::::::::::::::
Hmu1229         :D:::::Q::S:A::::A:::::::D::::I