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4 genomes BUD2082 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1380

rrnAC3341

-

Hbo0996

- - -

NP0398A

-

Pairwise sequence scores
Consensus score1657 rrnAC3341 NP0398A Hbo0996 VNG1380
830rrnAC3341 1651 562 470 473
894NP0398A 562 1609 492 453
1009Hbo0996 470 492 1691 699
953VNG1380 473 453 699 1732

224 symbols
consensus       ---------MAAWINPRDADRSAW--AGQDDEDS-RPPRTRPTIERAAETSLPYQRREAR
#oth            111111111232.21.3132222.112.23123212222221131..31222.1132132
rrnAC3341       ::::::::::DE:VD:DE::PAQ:RRT:PH::LR::GTE:ISVV:::RR::::::HEIEI
NP0398A         :::::::::-M:::::Q:SK::::::::KS:AG:DAD:A::SVYQ::V:ANT::R:::RV
Hbo0996         :::::::::::T:L::::G:AD:::::::G::P::::::IP::L:::H:V:A:::FS:::
VNG1380         MTMVYCDRPVT:::D:NET-::N:::-:::QD:T:L:D:A::::::::::G::F:Y::Q:

consensus       RHDGTLADVQFDGREYTSAEIKYNGGVDAARALKLHARGHLWGGNEDD----QRFKIQYR
#oth            33312232222213..222223122213333321122..31.22322211222.123.11
rrnAC3341       H:TDNV::-::QSS::EH:R:T::SSI:TKSRI::LT::V::::G:RH:::::::QV:::
NP0398A         :LS:ESVAE:YRS::::D:A:S:DTV:S::GERRVV::::::::DD::::::::YR::::
Hbo0996         TYY:::TG:E:::D::P:T:V:VV:::TRG:T::::V::F::RP:Y::GPNAY:::S:VV
VNG1380         YF::::S::RL::I::::G:YVV::::MGDH::::::::LI:VTE:PA::QCR:::L:VV

consensus       RDQPPTETVPFDTYDVWQRYQFGSVTNDDDGEPEFEPDENPEQTERTDLAFDALFAPVRE
#oth            .33..11.1.112.32.2.1.2.1113233232312122222123.11231231231213
rrnAC3341       :PP::::::::G::TA:S:::Y::IEQT:::VTFAAA::E:GESL:-::DWKSM:D::Q:
NP0398A         :KG:::::::::E:E::V:::::T::HIQK:::V:K:SA:::EEK:-T::W:K:Y:SD:F
Hbo0996         :E::::::I:::::QF:::T:R:T::::GV-IV::::E:GT:::V:::QG::E::E:L:I
VNG1380         ::S::AD:::YGD:::::::::::::V:PIEG:T::::D:DI:::::TAP:G::LK:::L

consensus       RIAELELVRNPSLARYRLKEADEWEAYGDVFRWDPNAFARRP--
#oth            122.1..11..21.3.1.2.312.121221.112131.332221
rrnAC3341       ::::::::::::F:K::::::::::T:QTR:QY::DV::MG:::
NP0398A         :LI:A:::G::E::::::::QEV:::IR::::Y::K::GVT:::
Hbo0996         H::::::::::Q::S:V:R:T:R:D::::::::R:S::N::EVS
VNG1380         HVS::::I::::F:Q:::E:RE:::E::A::::KG:::QQ:VE: