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4 genomes BUD2087 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnB0242

HVO_A0522

Hbo3598

- - -

NP2606A

-

Pairwise sequence scores
Consensus score2930 Hbo3598 NP2606A rrnB0242 HVO_A0522
2471Hbo3598 2943 2202 2230 2217
2447NP2606A 2202 2983 2185 2229
2493rrnB0242 2230 2185 3229 2245
2564HVO_A0522 2217 2229 2245 2903

431 symbols
consensus       --------------------------------------MRDAYIVGAGQSPFGAFPDESY
#oth            11111111111111111111111111111111111111.11..11....121.11.2...
Hbo3598         :::::::::::::::::::::::::::::::::::::::PN::::::::T::::::S:::
NP2606A         :::::::::::::::::::::::::::::::::::::::P:::L::::::DY::::::::
rrnB0242        MLMIKWFGIGHCTASCVLGLRLSANDAKLFFSTLRVPC:::::LI::::T:::SM:E:::
HVO_A0522       ::::::::::::::::::::::::::::::::::::::::::::::::::KY::::::::

consensus       RSLFATAFEAAAASVDGGIDAAAIDEAVVGSLGVGGRQLGLSGPAVTEHVGLHGVPCSRI
#oth            .1..32.111.33.1221322311...11.1...........1..1...1..111.12.1
Hbo3598         :T::TE:::::V:::::SLN:ED:::::::T:::::::::::A::::::::::NI:::::
NP2606A         ::::R:::::::E::PE:F:KD:V:::FI:T:::::::::::::::::::::D::::T:V
rrnB0242        ::::DH:VSE:ID:::H:::TN:::::::::::::::::::::::A:::A::::::SV:V
HVO_A0522       :::::::::E:LG:A-::VE::D:::::::::::::::::::::::::::::::::::::

consensus       ENACAASGFAVRQAVQAVKSGMADVALAGGVEVMTDMSGDVTKYWLGVSGETEWERLTGT
#oth            ......1.1........11......1....2...1.1.1.21...............1..
Hbo3598         ::::::G::::::::::IE::::::V::::::::::::::T:::::::::::::::::::
NP2606A         :::::::::::::::::::::::::V::::F:::S:::S:A::::::::::::::::S::
rrnB0242        ::::::::Y:::::::::::::::::::::::::::::S:::::::::::::::::::::
HVO_A0522       ::::::::Y:::::::::::::::::::::Y:::::T::::A::::::::::::::::::

consensus       TFSGVYAQMASAYLDAYDASPEHLSRVAVKNHANGAKNPKAHLGFECSLDDARSAPVVAD
#oth            ..1.....1.1.1113.2112121.2......1......1.1...1...1..32..2...
Hbo3598         ::::::::::D::::Q:::T::D::::::::::::::::::::::S:::E::TN::T:::
NP2606A         ::::::::::::HM:R:GTTG:Q::::::::::::::::H:Q::::::::::Q:::M:::
rrnB0242        ::::::::::::::RE:E::E::::M::::::R::::::::::::::::E::VG::::::
HVO_A0522       ::A:::::I::::::::::::D:F:K::::::::::::::::::::::::::::::::::

consensus       PLNLYHCCPTSDGAAAALVASEDVVNAYTDDPVRVAGVGAASDRVGLFDRDSYTAISASQ
#oth            ...............21.21.12.13311.121.1.....1.11...11.21..2121.1
Hbo3598         ::::::::::::::::V:L::G:::SE:::ER::::::::::E::::A::::::G:::::
NP2606A         :::::::::::::::C:::V::A::DD:::::I:::::::G::N::::::ET:::VP:::
rrnB0242        :::::::::::::::V::I::::::GQ:::::::I:::::::::::::Q:N:::S::::E
HVO_A0522       ::::::::::::::::V:::::G:A::-C::A::::::::::E:::::Q::::::VES:E

consensus       RAAATAYEMAGIEPDDLDFAEVHDCFAIAELLAYEDLGFCERGEAPQLLESGATELDGDL
#oth            2.132..11..21.1.1.........1.............21.11231222.2.121.21
Hbo3598         E:GK::::::::::::::::::::::::::::::::::::AP:::AT::RE:V:DP::::
NP2606A         :::ER:::::::::T:::::::::::::::::::::::::::::SGSFI:::::::::E:
rrnB0242        M::D:::DR::VG:::::::::::::T:::::::::::::D:::::::::A:T::S::AM
HVO_A0522       ::::A::::::LG:::V::::::::::::::::::::::::::H::E:VD::::::G:::

consensus       PVNTSGGLKSKGHPIGATGAGQVVEAFKQLTGRAGDRQLAAPHYGLTHNVGGSGGAAVVH
#oth            ...2...............1..2....1..1.3.1...113132...........111..
Hbo3598         :::::::::::::::::::T::M::::D::::S::::::DD:T:::::::::::::T:::
NP2606A         ::::::::::::::::::::::::::::::S:K:::::VDS::R:::::::::::::I::
rrnB0242        :::L::::::::::::::::::L:::::::::G:A:::::::K::::::::::::S::::
HVO_A0522       :::P::::::::::::::::::::::::::::::::::V:GASV::::::::::::::::

consensus       ILEREAAR---
#oth            11.31222111
Hbo3598         :::Q:V:::::
NP2606A         VF:K:QEVSAP
rrnB0242        :::::::::::
HVO_A0522       V::GG:L-:::