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4 genomes BUD2092 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnB0238

HVO_A0524

Hbo3683

- - -

NP2630A

-

Pairwise sequence scores
Consensus score2156 NP2630A rrnB0238 HVO_A0524 Hbo3683
1639NP2630A 2175 1414 1455 1516
1778rrnB0238 1414 2162 1647 1614
1926HVO_A0524 1455 1647 2152 1823
1886Hbo3683 1516 1614 1823 2173

296 symbols
consensus       -MQVAVLGAGTMGHGIAQVSAMAGHDVTLRDIEAEYVDNGLDAIESNLRGGVERDKVTEA
#oth            1.1.21....1.......11....11.21....122.21.121.12..11.12.1..112
NP2630A         ::::T:::::S:::::::S:::::Y::V:::::::R:E::IEE:RQ::E::::::::S::
rrnB0238        M:H::I:::::::::::::::::::::S::::::DI::D::T::::::EE:IA:E::::S
HVO_A0524       ::::S::::::::::::::A:::::E::M:::::A:::D:::::::::::::D:::::PD
Hbo3683         ::H:::::::::::::::::::::::::M::::S:::Q:::::::E::::::::::::::

consensus       EMAATLDRLEGTTSLEAAVTDADLVVEAVPEDMELKRETLAEVESEVDDDAVIASNTSSL
#oth            111..1..13.1.1.22..21.1..1.....1.11.311232..232.22111.1.....
NP2630A         ::E:::::I::E:D:A:::S::A::I::::::::::KDV:SD::A:T:AET:L:::::::
rrnB0238        TAE::I:::K::::::E:::G::::::::::E:AI:H:::TA:::H::PATL::::::::
HVO_A0524       :::::::::S:::::::::::::::::::::::::::::V:::::L::::::::::::::
Hbo3683         :::::::::T:::::GD::A::::::::::::::::Q::MR:::GFA:::::L:T:::::

consensus       SVTEIASALEHPERGIGLHFFNPVHIMALVEIVVAEQTDDRTLAFAREFVRGIDKTAVEV
#oth            .1.111.1.12...22.1.....1.1.2...1.1....1231222.311.32...1211.
NP2630A         ::::M:::::::::VV:::::::P:L:D:::::I:::::::AES::VDY::E:::EDIV:
rrnB0238        :L:::::V:DY:::A:::::::::::::::::::::::SAE:I:R:::::N:::::P:::
HVO_A0524       :::Q:L::::R::::L:::::::::::G:::V::::::SES:::::T:::E:::::::::
Hbo3683         :::::L:::::::::::M:::::::::::::V::::::::G::DL:H:::DD::::::::

consensus       RDSPGFASSRLGVALGVEAMRMVQEGVASPADIDTAMELGYNHPMGPIELGDVVGLDVRL
#oth            2.11...1....121.1..1...1....1.2.1.2..1...11....2....2.......
NP2630A         :::A:::T::::LVT:L::I:::E::::::::::E::K:::GY:::::::::H:::::::
rrnB0238        A:A::::::::::S::::::::::::::T:Q:::::::::::::::::::::::::::::
HVO_A0524       G:::::::::::::::::::::::::::::::V::::::::::::::L::::A:::::::
Hbo3683         ::::::::::::::::::::::::::::::E:V:A::::::::::::V::::::::::::

consensus       DILEYLREELGERFRPPQILKRKVRAGKLGKKSGEGFYVWEDGEIVGASEDWGDA-
#oth            2.1.1..1..........1.11..........1..........12..311111.31
NP2630A         H:A:H:::::::::::::A:RQ::::::::::::::::::::::R::M:G::::DE
rrnB0238        :::::::D:::::::::::::::::::::::::::::::::::D:::T:GE:::::
HVO_A0524       ::::::::::::::::::::::::::::::::T:::::::::::::::P::VM:R:
Hbo3683         G:::::::::::::::::::::::::::::::T:::::::::::K::V:::VM:Q: