Home |  Text search
[L] (XerC) COG0582 Integrase
4 genomes BUD2099 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG5115

VNG6112

pNG6016

- -

Hmu3365

- -

NP6156A

-

Pairwise sequence scores
Consensus score3253 Hmu3365 NP6156A VNG5115 VNG6112 pNG6016
1055Hmu3365 2867 1005 1046 1046 1003
2751NP6156A 1005 3236 2695 2695 2726
3197VNG5115 1046 2695 3245 3245 2923
3197VNG6112 1046 2695 3245 3245 2923
2972pNG6016 1003 2726 2923 2923 3208

416 symbols
consensus       MNQNTSPTRDGSTPLDDSFERYLQDKGKGRGGDGGNYRRNAARELERFAEWAAGDRGDDD
#oth            12223223222222.211111..11....11121.1....11.....1111111121311
Hmu3365         :TASE:GGS::EDD:R:ALDA::RS::::PNNES:A:::::E:::::::DYLRD:-----
NP6156A         ----MT:RERADQS:ES:L:::::::::::::::::::::VE::::::V:::::EH:R::
VNG5115         ::::::S::::::::::::::::::::::::::::::::::::::::L::::::::::::
VNG6112         ::::::S::::::::::::::::::::::::::::::::::::::::L::::::::::::
pNG6016         -----M:D:AL:::::::::::::::::::::G::::::::::::::::::::::::A::

consensus       WTGITPDDVDRDPTFDDLDERVFREYARHLAGDRGLKQNTVQTYYRYISAWCGWCVNEGY
#oth            11.121121212111211.1121.1.1.11211....11..21..1.1...1..111..1
Hmu3365         --:T:--------SLAEI:AGDL:N:I:DELTT::::PQ::HK::G:V:::I::AQR::L
NP6156A         :::::::G:G:E:::::I:::T:::::::::::::::::::K::::::::::::::::::
VNG5115         ::::V::::::::::E::::::::::::::::::::::::::::::::::::::::::::
VNG6112         ::::V::::::::::E::::::::::::::::::::::::::::::::::::::::::::
pNG6016         ::::A-:::G:E::::::::::::::::::G:::::::::::::::::::::::::::::

consensus       LEAHYAQRASAMAPLPEDDGRKPGDQQAWTSEQRHTLTRHVDERARDAVEAYATLPADTD
#oth            111..11.11.11...11...1111..1.1111.1111111..1.11.11112.112212
Hmu3365         VDE::GI:TD:RE:::DR:::TEER::T:RR:D:EAFLSYL::::HE:ID:DG:------
NP6156A         ::::::::::::::::D::::::::::::::D:::::::::::Q::E:I:T:T:::EE:A
VNG5115         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6112         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
pNG6016         :::::::::::::::::::::::::::::::::::A::::::::::::::::T:::E:::

consensus       PLDKQRARYAALKAARDRALVFVLAYTAVRVGELLRDPNDPRRRGVRWEDLSLDDGSMDV
#oth            1211111111.11.1.....111..111..11.1.11.1.1..1.1111.11121121..
Hmu3365         ---------T:YA:T:::::AYL::FAG::GA:V:AM:D:D::D:ANAG:::NAVDAL::
NP6156A         :I::::::::::::::::::::::::::::::::::::D:::::::::::ID:K::R:::
VNG5115         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6112         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
pNG6016         ::::::::::::::T:::::::::::::::::::::::::::::::::::::::::::::

consensus       YRKKQQWDAASLPDPVISPLRSYRQLMDPPTERWPVFPTFDQRTLAEIVQDGLADRGERP
#oth            11.1.1.11111.112111121112121.11.1..1..1.1211.122131311221211
Hmu3365         LG:S:A:ETRAV:PQARPAIERWLTVY::EP:-::L::S:HYPS:YDRLS:DVD------
NP6156A         :::::::::::::::T::::Q:::K:LA:::::::::::::::::::L:KET::E::N::
VNG5115         :::::::::::::::::::::::::::::::::::::::::H::::T::::::::Q::::
VNG6112         :::::::::::::::::::::::::::::::::::::::::H::::T::::::::Q::::
pNG6016         :::::::::::::::::::::::::::::::::::::::::::::::L:REE::E:::::

consensus       DTITEQRDEYARNLLLALDEDVRPPSITTDGARSILQRLSDAAEIDIDHPKHDYLAPHGG
#oth            231232121.11211111.3.3...12....1.1211..121.1.11111111..11..1
Hmu3365         ---SDALSG:SDIFAAFR:T:A:::AL::::::RLFK::CAD:A:EVA---EG::QL::A
NP6156A         :D:EA:::G:::D::::::A:M::::M::::G::V::::::D::::::::::::::::::
VNG5115         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6112         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
pNG6016         EA::KR:A::::D::::::V:I::::::::::::::::::E:::::::::::::::::::

consensus       RRGMGEVLVRAFGYTVAARYLDNSEEMVRERYSHIEAGELGDVATEALEEIDQ---
#oth            ...1.1..1111.111..11....1.1..11..111.1.1111121.1111.2331
Hmu3365         :::V:R::ALQQ:IDA::DQ::::P:V:::A::EVL:S:RAAKTGD:F:QH:GDE:
NP6156A         :::::::::::::::::::::::::::::K::::::::::::::A:::D:::GSRQ
VNG5115         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6112         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
pNG6016         ::::::::::::::::::::::::::::::::::::::::::::::::::::SVPQ