Home |  Text search
4 genomes BUD2101 4 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC2012

HVO_1467

 -

Hmu0474

 - -

NP4394A

 -

Pairwise sequence scores
Consensus score1222 NP4394A Hmu0474 HVO_1467 rrnAC2012
416NP4394A 1174 199 174 174
648Hmu0474 199 1267 282 413
725HVO_1467 174 282 1287 506
775rrnAC2012 174 413 506 1392 

203 symbols
consensus       MAEA----------AAASRP-R--RGR-T----LATWTLATFNLVAFVLAGLLAAHASGG
#oth            .1.31111111111133332212222.212211132.122122113221321111111.2
NP4394A         :::P::::::::::------:-::AD::-::::::V::AG:AA::VVTVGA:::G:LV:V
Hmu0474         :::T:::::::::::::::RT:ETI::P:TT:::TA:::::T:T:G::::V:VP:Y::::
HVO_1467        :G:::::::::::::GGVG::-::::::-::::FE::VVSS:::::LS:V:::::::::A
rrnAC2012       :G:NQREREAMAER:SETK:A:DA:Q:S:RPVP:V:::::::DTAL:::L:V::::::::

consensus       LADVLAALNTAVGVAVFAYLWLLFAAATRWALGRVDLADAR-G---LQRLVLRAAAAGAL
#oth            .122.1321.121112.31..113321221322312231332121113212131312.21
NP4394A         :ST::P:IG::AAGLL:G:::::SLV:A----:F::VL::KD:Y::PFAIART:::G:GV
Hmu0474         :S:::PS::::::::G:LA:::VVG:T:H:L::H::PSSDS:-:::PV::T:W:GSC:::
HVO_1467        ::GE::NFG:LP:::::::::::T::::::::ADGG:::L:T:LNG:W:::::GF:::::
rrnAC2012       :::L::G:::L::::::C:::A::VL:V::VHS::A:V:VP:-:::::T:::HGV:::SV

consensus       AGVAFLLGLVVGAAVPT---GGAPLQTVVLVAAIGVAVAAIVGAVVGALAALLDAACYRI
#oth            112211112121331122221232122221221212311121.1.2.3123211322222
NP4394A         :V:YLTVV::::FVS:::::-PT:VEPAPA:V:RT:V:G:SI:::S:G:F:AFGL::G::
Hmu0474         ::IV::V:I:::LG::AAVV:SFG::::::L::T:TP::::::::::IA:G:::VVLL::
HVO_1467        I:A:::::V:LVG::LN:::-::::VALA:I:L::::A:SV::G:I:::SVV:::G::WA
rrnAC2012       :::::::::LAV:L:::IQG::VS:::::::LL::AG::::::G:::L::S:::I:V:GL

consensus       AGRLA------AGCERAADGRRR
#oth            12213111122313322321213
NP4394A         GRAV:::::::D::VE:G::::P
Hmu0474         :D:VT::::::------PPSD:Q
HVO_1467        ::::VGRWAESN:SG:::::E--
rrnAC2012       ::S:L::::PE::G::VTES:::