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4 genomes BUD2104 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0885

-

Hbo3092

Hmu1570

- -

NP4232A

-

Pairwise sequence scores
Consensus score2979 NP4232A Hbo3092 Hmu1570 rrnAC0885
2280NP4232A 2986 1971 1880 1961
2411Hbo3092 1971 3127 2074 2057
2439Hmu1570 1880 2074 2994 2172
2505rrnAC0885 1961 2057 2172 2997

421 symbols
consensus       ---------------------MTHGFDLAARLAQRDAQGLRRHLAPAESVAARTRLADDP
#oth            111111111111111112222212..1132..12.1321...2.31111.2112.3.2..
NP4232A         :::::::::::::::::MQRYD:R::::E::::D:EDT::::D:::VD::G:SA:T:V::
Hbo3092         MTKETEPRPSGGAEGTEATNEGDF:::P:::::E::Q:::::T:Q:V:H::::S:M:S::
Hmu1570         ::::::::::::::::::::::::::S:GR::E::EER::::::N::::::G::::::::
rrnAC0885       ::::::::::::::::::::::::::::NE::E:::::N:::::EV::::S::::F::::

consensus       GGEPPAFGDEELVFAANNYLGLADDDRVQRAAEDAARAVGTGAGASRLVTGDTGLHRALE
#oth            1.22131.2122..........12.3.121..232.221.1........1...32..2..
NP4232A         K:::::::::K::::::::::::G:::LAA::A:T:S::::::::::::V:::PA::S::
Hbo3092         :::K:RY:A:QI::::::::::TQ:E::V:::RE::E::::::::::::::::::::G::
Hmu1570         ::GTAD::EP:::::::::::::::G:::::::T:::SI::::::::::::::T::::::
rrnAC0885       K:D::E:::::V:::::::::::::S:::::::LG::T::S::::::::::::KV:::::

consensus       RDLAASKGTERALVFSSGYAANVGTIDALDPDVVFSDELNHASIIDGCRLGAAETVVYDH
#oth            .1..12.11....1........1.112..2..11...1......1..1.2122111....
NP4232A         :R:::E:SA::::::::::::::::LT::S::RI:::::::::::::A::SG:DIE::::
Hbo3092         ::::DA:::::::L::::::::::::G::::::::::A::::::::::::SD::::::::
Hmu1570         ::::D:::::::::::::::::::V:::::::::::::::::::V::::I::D:::::::
rrnAC0885       ::::::::::::::::::::::I::::::A:::::::::::::::::::V::S:::::::

consensus       CDAADLAAAMADRAADADADESWLVVTDSVFSMDGDVAPLADICDAADRYGAWVMVDEAH
#oth            ..112.2131221132223111..11..........2...11...11121...1......
NP4232A         ::::A:E:C:R:C:DE:A::::::::::::::::::::::::::::::T:::::::::::
Hbo3092         :::DS::::::::SRSSTP:D:::I::::::::::::::::::::V:E::::::::::::
Hmu1570         ::P::::RR:DA:SG:::S-:::::L::::::::::R:::S::::::E:H::::::::::
rrnAC0885       ::PD::R:KL:T::::V:E::Q::::::::::::::I:::SA::::V:E::::L::::::

consensus       ATGLYG-DGGGIVQREGLSDRVDVQLGTLSKALAAQGGYVAGDEALIEYLLNAARSFVFS
#oth            ...121221..1.122.111.111.1.......11...11..213.1.2.1.1..1....
NP4232A         :::V:-:-D::::GQR::E::::::::::::::G::::F:::::P:V:::::::::::::
Hbo3092         :::::-::::::::::::::::H::M::::::::S:::::::ST::V:Q:A:::::::::
Hmu1570         :::VV:A::::V::AQ:V:::I::::::::::::::::::::A:T:::F:::E::T::::
rrnAC0885       ::::F:DS:::V:::::::H:::I::::::::::S::::I::::V:::::::::::::::

consensus       TGLAPPAAAAAREALRIAREEDRRERLWDNVARLRDGLEALGYEVLGDTHILPVVVGDRG
#oth            ...2..111..211.11.12331223..22.31..1...12.11.1.2.1....11.1.2
NP4232A         :::::::::::ERG:AL:PQ--Q:KP::S::D:::S:::::::::W::::::::::::::
Hbo3092         :::T:::VG::::::::::::K:H:Q:::R:S:::S:::::::D:::T:Q:::::I:::S
Hmu1570         ::::::::G:::::::::::GT::::::E::E::::::::A:F::::::::::::::H:D
rrnAC0885       :::S::N::::C:::::::KT::AAE:::T::T::::::TM::::::E::::::I:::::

consensus       DALALADRLRDRGIVAPAIRPPTVPEGTSRIRVAPMATHTAADIDRCLDAFEAAGTEVGL
#oth            ..21..211112.............1.1..1.21.1...1111.11..1..13..1.211
NP4232A         :::::::::E:A::::::::::::::::::::L::Q::::::::::::A:::V:::::::
Hbo3092         ::V:::E:::E::::::::::::::::::::::S::::::E::::::::::::::Q:LD:
Hmu1570         ::M:::TAV::::::::::::::::A:R::L:I::::::DE:A:::::::::R::::C::
rrnAC0885       :::E:::::::H:::::::::::::::::::::::::::::D::AQ:::::RT::::::V

consensus       L
#oth            .
NP4232A         :
Hbo3092         :
Hmu1570         :
rrnAC0885       :