Home |  Text search
[L] (-) COG0675 Transposase and inactivated derivatives
4 genomes BUD2111 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG6361

pNG3034

rrnAC1676

- - -

Hut0600

Hut0758

-

NP4280A

-

Pairwise sequence scores
Consensus score3524 Hut0600 NP4280A pNG3034 rrnAC1676 VNG6361 Hut0758
2464Hut0600 3542 2285 2335 2342 2413 2279
3194NP4280A 2285 3535 3184 3134 2928 2699
3339pNG3034 2335 3184 3521 3271 3030 2810
3326rrnAC1676 2342 3134 3271 3515 3002 2806
3164VNG6361 2413 2928 3030 3002 3503 2800
2939Hut0758 2279 2699 2810 2806 2800 3223

451 symbols
consensus       MKRTNTFAVRPLSDDGEQVLRDLLDASAALWNEINYQRLMRYNDEDGFEGEDVWDADTGR
#oth            1112111121212422212111111121111113112111..1.12.112111......2
Hut0600         ::::::::::S::PT:::L::::::::::::::T::E::I::D::::YKN:::::::::T
NP4280A         :::A::::M:::TA:D::::::::::::::::::::::::::::K::::D:::::::::A
pNG3034         ::::::::::::T::::::::::::::::::::::::::::::::N:::::::::::::A
rrnAC1676       :::A::::::::::::K:::::::::C:::::::::E:::::::::::::::::::::::
VNG6361         :::::::::::::ET:::L::::::::::::::V::::::::::::::::-GI:::::::
Hut0758         ---------------------------------------::::::G:Y:N::::::::::

consensus       LEGKYKAVLGASTAQQVRRANSEAWRGFFENKKAYHDESNTSVTEHPEPPGFRGNEDDGR
#oth            ...1..11.......1.1.1.1....1.122.221..1.1.......2....1..1.1..
Hut0600         :::::::T:::::::::I:K:::::::::R::EK:::::D:::::::T::::W::K::::
NP4280A         :::::::::::::::T:::::T::::S::RL::QF::::::::::::::::::::K::::
pNG3034         ::::::G::::::::T:::::T::::S::::::::::K::::::::::::::::::::::
rrnAC1676       :::::::::::::::T::::::::::::::S:::::::::::::::::::::::::::::
VNG6361         :::R::G::::::::::I:K::::::S:SHL:DQ:::::::::::::N::::::::::::
Hut0758         ::::::G::::::::::I:K:::::::::::::::::::D::::::::::::W::K:E::

consensus       VLKGVIRNDAYTVEWGDRSRLEILVGSELRDRHNHPKGRLRLEIVGDPNWPDYEDQGRLE
#oth            2.21.1.111.12...1.....12..21.1..111111......2.2.1.11..2.1..1
Hut0600         K:HT::::TS::::::E::::::::::::K::YD:-T:::::::A:E:H::E::T::::D
NP4280A         :::::V:K:::S::::::::::MV::EQ::::::S::S::::::::::::S:::::::::
pNG3034         :::::V:K:::::::::::::::I::K:::::::S::S::::::::::::::::::::::
rrnAC1676       :::::V:K::::I:::::::::MV::K:::::::S::S::::::::::::::::::S:::
VNG6361         Q:RT::::::::T::::::::::::::::K::YD:-T:::::::A:N:::::::K:::::
Hut0758         K:HT::::TS:::::::::::::::::::K::YD:-T:::::::T::::::E::K::::D

consensus       LWYDETDSTFRASQPVTVSDDARATPLADEKAALDIGANNLVACTTTTGEQYLYEGRELF
#oth            ..1...13..........1121.2....111..................3....1.111.
Hut0600         ::F::::D:::::::::::A::::::::::T::::::::::::::::::S::::D:IRP:
NP4280A         :::::::C::::::::::::::::::::N::::::::::::::::::::Q::::::::::
pNG3034         :::::::::::::::::::::::G:::::H:::::::::::::::::::K::::::::::
rrnAC1676       :::::::N:::::::::::::::D::::::::::::::::::::::::::::::::::::
VNG6361         ::::::E:::::::::::P:S:::::::::T:::::::::::::::::::::::::::::
Hut0758         ::::::::::::::::::::EI:D:::::::::::::::::::::::::K::::::::::

consensus       QRFRETTREIARLQSKLDEGRYSSERIRRLYRKRTRRRDHAQEALCRDLLERLYAEGVDT
#oth            1...2..11..1..1..311.11.1..11..21111......11.1...111..31..1.
Hut0600         E:::A::ER::E::A:::DQ:RT::::DH::DTMYA::::::D::V:::V::::D:::S:
NP4280A         :::::::::::::::::P::::::K::::::::::::::::::T:::::::Q::G:::::
pNG3034         :::::::::::::::::R::::::::::::::::::::::::::::::::::::ED::::
rrnAC1676       :::::::::::::::::E::::::::::::::::::::::::::::::::::::::::::
VNG6361         :::::::::::::::::P::::::::::::::::::::::::::::::::D:::::::::
Hut0758         ::::D:::::::::::::::::::K::::::Q::::::::::::::::::::::::::::

consensus       VYIGGLTDVLDTHWSVETNAKTHNFWAFKQFTERLACTAEEYGISVEVRSEAWTSQECPQ
#oth            1.1.112...1...1211.1.......112.11..21111....2.1111.1..1....2
Hut0600         ::V:DIR:::E:::MP:V:R:::::::YRR:ID::E:VC:::::E:VEEP:S::T::::E
NP4280A         ::::::::::E::::A::::::::::::::::::::W::D::::::::::::::::::::
pNG3034         ::::::A::::::::::::::::::::::::::::::::D::::::::::::::::::::
rrnAC1676       ::::::::::E:::::::::::::::::::::::::::::::::::::::::::::::::
VNG6361         ::::::::::::::::K::::::::::::K:::::::::::::::::::::::::::::R
Hut0758         L::::::::::::::::::::::::::::::::::V::::::::T:::::::::::::::

consensus       CGSTDRTTRHQDTLTCPCGFEGHADLTASETFLERHTEQAVRPMARPVRFEWDDHEWSES
#oth            ..1121.1.21.111.2...1....11..11..1.21332.11..1..1.1....2...2
Hut0600         ::ERED:E:NG:LFR:V:::::::::K::QL::::E:GMI:GL::Q::C::::::::::R
NP4280A         :::::::::Q:::::::::::::::V::::::::::::K:::::::::::::::::::::
pNG3034         :::::::::::::::::::::::::::::::::K:::SKE::::::::::::::::::::
rrnAC1676       ::::G:::::::::::Q::::::::::::::::K:QIK:::::::::::::::::::::L
VNG6361         ::::::::::::::::::::Q::::::::::::::::K::::::::::::Q::::T::::
Hut0758         ::::::::::::::::::::::::::::::::::::::E::::::::::::::::D::::

consensus       PRS--RESPKEQRTDPSTVHRDGNVASGESA
#oth            11.11321...11..1..1222.111121.1
Hut0600         SS:PA:A::::DH::R::HRTV:K:::V:::
NP4280A         :::PA::::::::::::::P:::::V::D:-
pNG3034         :::::L:::::::::::::::::::::::::
rrnAC1676       :::::H::::::::::::::::::I::::::
VNG6361         :::::Q::::::::::::::H-::::LR:::
Hut0758         :::::H-R::::::::::::::::::::::-