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4 genomes BUD2121 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3271

- -

Hmu2177

Hut0004

Hut0223

-

NP1846A

-

Pairwise sequence scores
Consensus score2229 Hmu2177 Hut0004 rrnAC3271 Hut0223 NP1846A
1381Hmu2177 2293 1516 765 809 850
1361Hut0004 1516 2215 751 791 816
1181rrnAC3271 765 751 2211 864 896
1415Hut0223 809 791 864 2221 1539
1500NP1846A 850 816 896 1539 2255

312 symbols
consensus       --MSRTVLCVDPDTDARADTVETARAAGDDLDAV--TAGSLDDATAALGTD-VDCVVTAY
#oth            123342211.22.312142.133224323323212131311311232233212231..11
Hmu2177         :MP:HRI::::::E:::Q::::RL:TELTEF:P:FE::AT:::::T:VS:::LAA:::E:
Hut0004         ::-------::G:K::SE::A::I:SQLA:::P:VE:::T:A::E:L:::::T:VI::E:
rrnAC3271       MSD:P:::::Q::A:E::E:ADALAD::LAVEG:::--::::TL::::DRS::::::::F
Hut0223         :::D::::::--:::::IS::S::VETE:N:T:I::E:R:VE::LDVI:SEP:VG:::::
NP1846A         :::AQ:::::--::PD:VS::TD:V::::::N::::S:T:VS:::EV:ID:P:V::::::

consensus       DLADGTGLDIVDAVRDVAPDAGVILYTDAAPGEIDTAELEETIVEYVNRDSPDATERLAD
#oth            ..2..1.21214.21233.22212.1.132.3312143312321..1212312231..22
Hmu2177         ::::::::EL:T::::T:::::C::::::::DA:S:D::RG::T:::GKG:VFG:::::R
Hut0004         ::S::::F:::S:AE::C::::::::::TD::TL::I::RGA:T:::GK::VFGE:::::
rrnAC3271       ::P::D:F:V:::::A:N:ACV:T:::EH::SDLPRGGP:Q-V::::P:TV:ESR:::::
Hut0223         :::::::M:VIQ:::EQT:QTP:V:F::VS:A::::NSV::VL:::L:::I::::D::GF
NP1846A         ::S::::::::G:I:EH::QTPCV:F:::S:::::::AF:::::::L:::L:::D:::SF

consensus       LVADTIEHSAQAGYPAPQNEAERLAALQQYDLDDLAIEESFDRLTDLAAAHFDVAVAFIG
#oth            2242223332.22114.31.4...211221.2.322221111.1.1.2131.11221111
Hmu2177         :LQT:V:GKS::S::L::::R:::::::S:::::R:LL::L::I:::::T::S:ER:S:N
Hut0004         ::RT:::TRS:GS::M::T:::::::::SF::::EELI::L::I::::::::::EQ:S:N
rrnAC3271       VA:MAAAEVT::A::V:ET:T:::::V::::V:Q::AIDA:::::A:MTS:::ID:::V:
Hut0223         I:N:V:D::::V:FLT:D::D:::D::D:::I:S:P:::::E:::::IT:::::::::V:
NP1846A         V:D:V:S::::V:FL::K::G:::ET:AA::V:A:P::D::::::::I:DR:::::S:::

consensus       LIEEHEENFLACTGA--DWDTLDREDTICTHTILQED-VMVVEDITEDPRF-SRNDQLED
#oth            11313113.1..2.2122.2112.1.1...11112122111...231.1..222313.43
Hmu2177         I:S::SQD::::Y:GANE:::M::Q:S:::F::VED:D:LA:::V::::::E::S:T:L:
Hut0004         ::T:YSQE::::Y:EAE::K:M::::S:::F:::E:SG::A:::V::::::Q::A:S:IE
rrnAC3271       :MD::::R:V::E::::N:R::A:::::::::::SDE:T:::::TH::::::AEV:A:KR
Hut0223         ::::D:::::::::G:::::S:T::::::::SM::::::::::::AN:K:::NK:E:::N
NP1846A         :::RE:::::::::::::::S:T::::::::SM::::::::::::D::K::::E:E::H:

consensus       LGIRSYAGANLTTRDGLVIGQVCILDDEPRSYSAAERADLRDLAATAMEILELRRRLRAN
#oth            11.11.2.1122323.31..21.3212...112231232.222.2211131111321444
Hmu2177         M:::A:L::::V::S:::::PL::Y::::::F:::DE:Y::::::V::DVI::HA::DGG
Hut0004         ::::A:M::::I:SN:::::PL::Y::::::F:P::K:Y::::::V::DLI:YHTQ:::V
rrnAC3271       :N::::::GRI:D:E:NA::A::CT:G:::R:TQT::D::QRF:DEVE:Q:L:::::---
Hut0223         :::V::::::M:SS::H::::::A:GH:::R:T:K:KH::EQF:D:::::::::QSVLD:
NP1846A         :::V::::::M:AP::S::::::V::H:::::D:G::ET:QQY:E::::::::::::HEL

consensus       DDE----EGDQ-
#oth            434211122221
Hmu2177         VET::::D:EEP
Hut0004         G:IE::::A:::
rrnAC3271       ---::::Q::R:
Hut0223         Q:V:::::VH::
NP1846A         :S:SAAT:V:::