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4 genomes BUD2123 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
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rrnAC3448

- -

Hmu2497

Hut0661

-

NP2488A

-

Pairwise sequence scores
Consensus score2640 rrnAC3448 Hmu2497 NP2488A Hut0661
1560rrnAC3448 3076 1016 531 681
1589Hmu2497 1016 2780 537 564
1061NP2488A 531 537 1957 577
1198Hut0661 681 564 577 2795

443 symbols
consensus       --RDMNPRQATLLAILAAVAIALAGLPAAP----------------ANAQATNEVA-QNG
#oth            123323222122121132113322122.22111111111111111112112233222312
rrnAC3448       ::--:S:::::::TV:VI:GTVAV::::VT:::::::::::::::::QET::ET::T::N
Hmu2497         MQV:::S::::FVVV::V::VGV:A:::SG::::::::::::::::::::::::T::E::
NP2488A         ::MSGTALRVGV::::L:G::::G:FA:::::::::::::::::::TA::SV----:--S
Hut0661         :M:YRV:VAVV::::GF::GPT:::AV:::ETPVAAPSDGLSADPV:::TTNGS:SPT::

consensus       SAA-DMGAQLSAFMQSSAAAANDTVDDGMWAAAFARAND-SERAALVEDRTQSLERRLQR
#oth            232132.1221..1.223121222.12..132123111312.2231111.122111.11.
rrnAC3448       ::S:G:::::T::L::NS:::::::EN:::RS:YNQS:G:T:::E::T:::G::::::E:
Hmu2497         TE::::::::T::::A:::ET::::ES:::::G:E:::E:::Q:R:AT:::SEI::::::
NP2488A         EN::SV::EI:::::TTD::TERD:::::FET::D::E:RA::E::::Q:R:H:QD:F::
Hut0661         :TTPTL:SKM:::::::TVS:DAS::::::N:GV::::T:::KRNA::Q:::::::::::

consensus       LQDRNATLEARYENRNIRNRAYAARRSRLAAEIAALERSINDTDRAARDAGVNATALDRL
#oth            .21.21112311223322133221332.13221311221112.212.232..1323112.
rrnAC3448       ::E::::::Q::::G::SEQ::V:Q::::TT:::G:QTA:::::T::EQT:::D:::E::
Hmu2497         ::E::R::TE:::::S:DETE:LV:T::::G::N::RH::D::AT:::V:::DPAGIE::
NP2488A         :A::R:::G:---EPTV:::SL::---:ID:GASGI:::V:H:K:S:A::::D:ES::E:
Hut0661         :E::L:AA:N--DSVDL::PNA::TVA::S:R:E:::::::E:::T::SV:::T:R::A:

consensus       RANASNLSGQQVAAIARGLA-G-GPPASAGPP----DRQGPPD-------EAGPP---GD
#oth            132.1222132.1331.1212122122221112222232.1..111111123..111113
rrnAC3448       KQ:::K:::::::S::::I::-::::ET:::-:::::D:::::VAGVNRS:Q:::DGV:T
Hmu2497         :GQ:R:VTTGG:PGVS::V:T:Q:::::::::DSIG:G::::::::::::::::::::S:
NP2488A         :::::R:R:PE::EL::::::-:---------::::---:::::::::::DR:::::::E
Hut0661         :SH:::M::H::::M::N:SA:PP:W::N:::ADPPG:S:K:::::::::SV::S::::Q

consensus       ----RGPAANAS--------AGPGAGDRGPARNESARGPPSERPRPGG-PEDG--T---G
#oth            22222..221321111111131121221.13332233.122212312.123212212221
rrnAC3448       NQSEQ::P::T:ERGANQSEQ::P:DVP:QQ::::DQ:::DDG:DDS::N:T:ES:QGN:
Hmu2497         DNAT:::::::T::::::::R::E:::::::NGTAGD::A:::D::::G:P::IG:GND:
NP2488A         :::::::SDGD:::::::::::::::::::GTD:E:::G:A::GG::::----::-:::-
Hut0661         ::::H:::-GPN::::::::GAD:TTTP::NETD:KT::G:IG:T:A:::K::::-:::-

consensus       ADRGNDTDPGRGD--------------SDNADDGGQADGAGASDDADTASDADADARDGH
#oth            133223232132211111111111111223333123321323222322312312223123
rrnAC3448       :EQ:::KGN:N::GSDSGDNTAGDDSD::E::S::ED:S::T::SD:SSDSGS::GS::S
Hmu2497         ::::GT:::::::::::::::::::::VQ:GS:::T:::GSETT:QS:::ES::GST:DT
NP2488A         -------------::::::::::::::-----------:SA:ESTP:ER::::P::::N:
Hut0661         :PEA:E:S::SNG::::::::::::::::SETP:Q:TGSV:S::::T:G::NSSS:VG:P

consensus       DDSGPD--DPSDGNEGS-----------------APGGNPANDNGGGNSEGGNNDDGQSG
#oth            222111111222.23221111111111111111121.13233232213232233231322
rrnAC3448       S:::SA:::G::::S::DGADDTSDSNGADDSGG:S:::ND:A:::::DG:QG::G::::
Hmu2497         :Q:TS::::SNR:DGE:::::::::::::::::::S:DG:SD:S:::S::N:PP:::P::
NP2488A         A:FT::::G::::QP:D:::::::::::::::::R:::P::-------------------
Hut0661         :ET:::RRG:TA:::TR:::::::::::::::::T:::SDNS:HRS:G:S:::DNI:SAT

consensus       GGGSGQGSDNARRRGA-------
#oth            22222332333333231111111
rrnAC3448       N:::::::G:SGSQ::SWIDQLS
Hmu2497         ::S::EPP:D:PGK:P:::::::
NP2488A         ----------------:::::::
Hut0661         :D:PETI:EPL:::LV:::::::