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4 genomes BUD2125 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0823

- -

Hmu1312

Hut0093

-

NP1450A

-

Pairwise sequence scores
Consensus score3003 NP1450A Hut0093 Hmu1312 rrnAC0823
1933NP1450A 3269 1148 1212 1216
1718Hut0093 1148 3414 1147 1208
1876Hmu1312 1212 1147 2908 1398
1947rrnAC0823 1216 1208 1398 3060

503 symbols
consensus       -------RNRVVLLGAALAAAAALGSGAATAAAAQPGDAGAE-------------EAADP
#oth            11111222322211133212233122.122321331212231111111111111233131
NP1450A         :::::MG:S:Y:V:VL:V::F::VAA:::::::DS::S:A::::::::::::::T:S::F
Hut0093         :::::::-MI:G:V:PMM:VSGP::I:SG:SEM:PTN:::F:RVSDESRLRGGASS:QI:
Hmu1312         :::::::M::Q::::CL:V::--VV:::TVTT:QET:SS:L-:::::::::::::-L:Q:
rrnAC0823       MRSIDDI:QM:R:VV:S:VL:LL::::::PL:MS::A:ESI-:::::::::::::GVQT:

consensus       --I--DRF--DRTTFEITVYENGSARWAIQYRQRLENDTEQRNFRAFAARFEENETDLYR
#oth            22122.1.11.1.2.21.212.1..3.3121321.21.21331.331.21.223.111.2
NP1450A         AD:DE:G:EA:::R:L::T:G::::D:TFR:E::::T:DDIE::GG:::::T:T:::A:T
Hut0093         FA:GD::::::::L::::::::Q::Q:RF::T::::::::ET::K:Y::E:R::::::::
Hmu1312         ::-:::G::::Q:::::::T:::::::S::HHR::T::S:K:Q::D::E:::TE::::::
rrnAC0823       ::-::::::::::::QV:L:Q::::K:::L::TP:A:::::QQ:EE::RE::QS:QP::Q

consensus       NFVSRADALAAIGTNATGRRMAATRFDRDAYTN---PL-DNRGIVEMSFRWTNFA-AREG
#oth            2.122133.123.211.1.3.2.2311.1.223222221223.11112.1.22..13322
NP1450A         E:QA:::S:::S:EE::D:::::S:::::::IEERP:AGTEF:::::T:::NG::::I:D
Hut0093         Q:::Y:GE::RT:::V:::Q:N::D:A:::R:G:::T::::L:::::::T:::::EQ:QT
Hmu1312         :::::SE::T:::R:::::P:::KS::::::::VTASF::A::TI:LA:T::H:::RTD:
rrnAC0823       :::EQSTL:TQY:::V:::N:S::NY::S:TVD::::::Q:T:T:R:::::R::::VV::

consensus       DAVVVGDVFDGGLYIGPDQSLVFEAGPGLAFASVEPEPASQSGPDSLARSESVTWVGEQS
#oth            23.2.1.1.3111112111222.12.12.2.22.2.2.31222121133.11.1.2..12
NP1450A         :S:T:::::V::::VD::NE:Q:::::::::E::D:::D:MA:-GT::E::T:::::::E
Hut0093         GG:L:S:I:E:::A:RA::Q:R:V:::N:T:D::::S:SNT::-L:VSD::::E::::Y:
Hmu1312         ER:::::::GENF:::::::I::VS:E::Q::A:::::T::TQ::::T::Q::::E:::Q
rrnAC0823       :::::S::::::F::::S::F:::R::E::::D:Q:A:::::A::::EN::::::N::::

consensus       FADRRPRLELQPRE--TT-----------------------------------------T
#oth            .211..112231232211222211111111111111111111111111111111111112
NP1450A         :T::::::VH----::--::::::::::::::::::::::::::::::::::::::::::
Hut0093         :::Q:::VAFS:VTAE::TEREETPTESTDETTSDGSETTVDRPTSERTVTSTEQAGASP
Hmu1312         ::QQ::Y:::E::STA::PAGG:::::::::::::::::::::::::::::::::::::S
rrnAC0823       :N::::YV::::::::--::::::::::::::::::::::::::::::::::::::::::

consensus       GQQADTQAATQAGDDTPAGAANG-SWLVGAAILGLVVVAGGSAIAWRNGAFDR-----GD
#oth            123212333232213212223212212111122312.22213121113.32332211113
NP1450A         E::::RPP:E:N::E:::P:N:::::::PL:A:LV::L:::T:::YQT:T:P:RTESG::
Hut0093         :TTT::T:T:V:::GSAG:PGL::GM:::LVVIT::::IAT----::G:Y::V::::::E
Hmu1312         :AES:::SPQSTTAPL:S:TD:PMV:I:::V::V:G:---:::::Y:::SVSL:::::--
rrnAC0823       ::S:SAEQR:T:D:::::E::G:P::MLP:::V::I:::::V:A-::S::LGGVL::::T

consensus       GDAEPDAGG---------GAAAGGS--DANAPARDAGSAADTATPGEPAVPDEELLSDSD
#oth            232223111111111111231321111133322332122211322222111112.12.21
NP1450A         :T::S::::VSTTETVDD::::::TAV:DG::D::::GS:::VAS:::::T::M:QP:EK
Hut0093         :E:S:G:::::::::::::DDGD:::::::Q::D--:::EA::ET:GQ::TGAA::::D:
Hmu1312         -------P::::::::::ET:STA::::TDTASET::::T:SQ::----I::::::::::
rrnAC0823       D:D::P:PT:::::::::AS:T::T::EQPST:SSGDAM:::D::D::::::::::T:::

consensus       RVRKLLERNGGRMKQVAIVDETDWSKSKVSMLLSDMEDDGEISKLRVGRENIISLAGHEP
#oth            ..12...3.......12..12.1...........1..11.211.........1..1.2..
NP1450A         ::VD::::::::::::::::::::::::::::::E::EE:TV::::::::::V:::::::
Hut0093         :::Q:::D:::::::T:::EA:E:::::::::::E:::::::T:::::::::V::P:S::
Hmu1312         ::V::::S::::::::N::E::E::::::::::::::E::::::::::::::::::::::
rrnAC0823       :::::::E::::::::D:::S:::::::::::::::::::D::::::::::::::::Q::

consensus       DAAGSPFDDEE------------
#oth            1..1.....22222211111111
NP1450A         E::::::::G:DDTDGDGNSDGT
Hut0093         :::R:::::LDEEDE::::::::
Hmu1312         :::::::::::::::::::::::
rrnAC0823       ::::::::::-::::::::::::