4 genomes BUD2126 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1276 - - Hmu1699 Hut0725 - NP2460A -

Pairwise sequence scores
Consensus score	627	NP2460A	Hut0725	rrnAC1276	Hmu1699
370	NP2460A	634	251	275	265
426	Hut0725	251	646	364	325
485	rrnAC1276	275	364	636	364
425	Hmu1699	265	325	364	636

95 symbols
consensus       --DSDSAEAR-GRRIVLRLYLIIVVIAGLMGAILGSARPEDLEP-ELFGVIALPPTPLGV
#oth            11313.23311.2121111.221.211.11.21112222221..1111.111111.13.2
NP2460A         MS:::::GVG:::::IVG::I:V:T::::L:::I:::GLR::::VSFL:IVTFQ:::T:L
Hut0725         ::V:T:SPI:::::V::GV::GV::::::::::::AT::DVV::::::::::::G:T::M
rrnAC1276       ::M:E:::::S:QQ::::::VA:::L::V::FV:::I::::::::::::::::::::F::
Hmu1699         ::--V:GTL:::D:L:V:::::::ALT:V::YV:AW:TD:T:::::::::V::::::V::

consensus       AIFGMVTIGIGLGVLLALVVYVAARID--DAARK-
#oth            .21.11.1.32..11.31.21.1311111.3.321
NP2460A         :A:::T:V:F:::LV:L:::V:SR::P:::E:--:
Hut0725         ::Y::::::LA:::::VA:S:::::F:SH:P:K::
rrnAC1276       ::Y:F:::::V:::::G::I::SE::::::::SS:
Hmu1699         :V:::::::T:::::::::::::NNF::::D:::E