4 genomes BUD2133 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0133 - - Hmu2532 Hut0035 - NP4600A -

Pairwise sequence scores
Consensus score	1011	NP4600A	Hut0035	Hmu2532	rrnAC0133
626	NP4600A	1019	462	498	444
677	Hut0035	462	1002	521	563
764	Hmu2532	498	521	1061	572
739	rrnAC0133	444	563	572	1018

140 symbols
consensus       ----MTDDPSFAIPARPRRRYPRSGGVEYEGQTEFRLEPATDRSDDALAALVERILAAGP
#oth            11111122.1.1..11.2.111221111.2.313.1.2.21232331.2322131.23..
NP4600A         MSVADD:T:T::::E::V:::::::::::D:E:V:S:Q:::A::::::::AI::V:DE::
Hut0035         :::::::L:::::::::::Q:D:A:RLS:K:SVL:::::-::PEGID:QV:L:T::QS::
Hmu2532         ::::::G:::::::::::::::S::::::::::M::::::::V:QT::GR:::SV::D::
rrnAC0133       ::::::T::::S:::H:Q::F:HGS::::::G:::::I:EQEQATPD::ET:VD::::::

consensus       YRYGDFHDLPMPLWLVRDEETADVFRVAIRDGAVRLHVLPATESDGLQRFYERLCAAGD-
#oth            ..2.1121...1111.1.1113.1...11...222.....3.112..22.12.1213211
NP4600A         :::::WF:::::VYI:H:D::G:T::::V::::IE:::::G::PP::AA::R:VR:RS::
Hut0035         ::H::::::::VVY:::::::S:::::S:::::LQ:::::::::::::Q::::::EGTE:
Hmu2532         ::S:A:IE:::::::::::DS::::::S::::C:::::::E:G:E::R:::D::V:::::
rrnAC0133       :::::::::::::::::::::T::::::V:::T:::::::T:::::::::F::::ET:EG

consensus       CAWAVDRRVD-------EGQ
#oth            32.1.321221111222123
NP4600A         H::R:TT:TG:::::::---
Hut0035         TE:::E:::E::::AVP:SE
Hmu2532         ::::::C:S:IADGPGY::G
rrnAC0133       GS:::Q:H:::::::::-::