4 genomes BUD2149 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2058 HVO_0623 - - - hla1346 NP1540A -

Pairwise sequence scores
Consensus score	1083	hla1346	HVO_0623	rrnAC2058	NP1540A
738	hla1346	1662	582	587	611
781	HVO_0623	582	1080	574	582
786	rrnAC2058	587	574	1038	706
830	NP1540A	611	582	706	1131

214 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
hla1346         MTFAIVLRVSSIGWSYPPHGLSVWRQHVRTAFPATDSASHRRGRYGPMSTVRTDGTNMFV
HVO_0623        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2058       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP1540A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ----------MGIPTSRRAETASSAEDAATAA--ETTVEVRCTGHVRRAVGTHELEYTFE
#oth            11111111222232121312232213233233222...1.11.....332.222211...
hla1346         RWLTGKHRIR::M::T:E:T:SE::SASE:TT::::::T::::::::TEL:KY:F:::::
HVO_0623        :::::::::::K:::AE:::::ATG:T::::ERV::::::KL:::::S:A:::RT:F:::
rrnAC2058       ::::::::::---MS:ETV:RQ:::M:-----::L:::::::::::::V::EPA:S::::
NP1540A         ::::::::MDA:SD:::V:LDE:A:G:CGGD:GGA:::T::::::::DT:::::::::::

consensus       GRTLRAFLDAFFAEY-DVRDLLIAETEADATTSGWAPRDADLPGTWAKNPEGEQTRAYAR
#oth            .3...2..211.32.1113111...2.111.12...133321..2.2...1....231..
hla1346         :D:::E:::EL:V::PELQEM::::S:EES:H:::::TPEE:::::T:::V::::I::::
HVO_0623        :E::::::E::::A:::::::V:::R::::::R:::-:VDRP::::R::::::::QP:::
rrnAC2058       :N:::D::::::Q:::::G:M:::::::::::E::::EI:::::D:::::::::::C:::
NP1540A         ::::::::Q:::GD::::E:::::::::E::::::::S:G:P::A:::::::::::SF::

consensus       VAVNGQFNENLDGLDTELEDGDRVALLYPFMFCC
#oth            111..3...111.11.1.12...12.21..21.1
hla1346         IL:::H::::EK:F:::::E::::::V:::::::
HVO_0623        :L:::V:::::::F::R:::::::::MK::LY:V
rrnAC2058       :::::E:::H:::::::::T:::IG:::::I:::
NP1540A         ::I::::::H::::N:::A:::::S:::::::::