4 genomes BUD2153 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1983 - Hbo3627 - - hla0312 NP1754A -

Pairwise sequence scores
Consensus score	3065	rrnAC1983	NP1754A	Hbo3627	hla0312
2494	rrnAC1983	4534	2321	1982	1922
2556	NP1754A	2321	3060	2030	2059
2371	Hbo3627	1982	2030	3066	2071
2379	hla0312	1922	2059	2071	3122

586 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC1983       MERRVCQVLDGRDGVGVGLDLFGTDFLKQCFPLGFLGTDCQNLIDCPPVALAGWPERCPF
NP1754A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3627         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
hla0312         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC1983       AFTEVRSEDIPPLFEGRVGIPSRRVLGTQAVDKLAVGRPDGRHPKDDAPDVPEDGLNVWT
NP1754A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3627         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
hla0312         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -----------------------------------------------------------M
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC1983       LAHGSGLDWPGYETTADARRLPDASRWACRSTAPGNKQPTTRSLCSNTYDVDVRERECA:
NP1754A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3627         :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::-
hla0312         :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::-

consensus       MEYDDSEAATELAERARELMDEVVIPVERELAGGGAIPDATIEALREAARDYDVYAPQIP
#oth            2112.2131211.11112111.2.1.2..131.22111122222..21..1212....12
rrnAC1983       ISFT::::::A::::::A::::::::R:::::::T::S:::VRD::A:::E:::::::::
NP1754A         LS:N:::K::::::::ND::E:::L:K:::M:::M:VS:G:L:E::::::::G::::::D
Hbo3627         :::::T:T:R:::K:V::FV::R::::::DYL:D:PV::EE:A::::E::ER:L::::::
hla0312         :::::IGRGP:I::AV::FV::T:L:::::WL:R:P::P:D:::::D::::EGI::::VA

consensus       EEYGGMGLDFRDVLPTFEEAGRSLLGPAAMRVAAPDEGNMHLLELAGTDAQKEEYLRPLV
#oth            1.1..2.12..11..2..........13.1.21........1..231111..111.2..1
rrnAC1983       ::H::::Y:::::::::::::::::::L::::D:::::::::::MQ:::L::S:::D:::
NP1754A         :::::::Y::::::::::::::::::A:::::D::::::::::::H:SEL::::::E:::
Hbo3627         A::::Q::N::::::A:::::::::::S:::I:::::::::T:::V::E:::::::::::
hla0312         :::::L::G::EM::V:::::::::::T:L:C:::::::::T::I:A::::::RW::::A

consensus       AGEIRSGFAMTEPMQGGGSDPKMIRTTAEKDGDEWVIDGHKWWTTGGVEADILLVFARTD
#oth            111.3...1....11.1......1211.2.1......1.......2.22.12.1.1....
rrnAC1983       E:::Q:::::::::::A:::::::::::Q:E:::::::::::::::::D:::::::::::
NP1754A         ::D:V:::S::::::::::::::LK::::::::::::N:::::::K:IQ:::::::::::
Hbo3627         ::::::::S::::AP::::::::::SE:R:E::::::::::::::Q:S:::V:I:M::::
hla0312         :A::D::::::::::::::::::LA:::::::::::::::::::::::::NL::::::::

consensus       QEAHPYEGCSVFIVPADADGVEIVRNIPHLGSDLDGIGHAEIRFNNVRVPEENLLGEENR
#oth            211...1.1.111........111.11..2.2323132....2122....1.11..1113
rrnAC1983       EDV::::::::::::::::::D::::V::M::QG:PK:::::E::G::::::H:::::GN
NP1754A         :::::::::::::::::::::::E::::::::ETH:::::::KY::::::::H:::Q:GM
Hbo3627         P:::::::T:L:L::::::::::::D:::V:G::L:SS:::::YE::::::::::::K::
hla0312         ::::::A::::IL:::::::::V::::::::EG:V:TT::::::DD::::V::T:::::E

consensus       GFAHVQQRLGPARLTHCMRYSGMAERALDIAKAYTSEREAFGSSLAEKQGPRFEIAEART
#oth            ..311.1............12...2...21.1..22..11.122111..31.121.131.
rrnAC1983       ::Q::::::::::::::::F::::::::S::::::T::Q:::D:V:D::HV::::::QE:
NP1754A         ::::::E::::::::::::::::::::::::T::M::::::::K:::::V::H:V::H::
Hbo3627         ::E:A:::::::::::::::T:::T:::EV:::::K:::::D:::S:::SV::TV:::E:
hla0312         ::TL::::::::::::::::A:::D::::::T::L::::G::EP:S:::::::R::DR::

consensus       RLHAARALVRAAADRIAAGNEARIEVSMAKVFAANVTQDAIDDALQFCGGNGIAKDLPIA
#oth            212.1.111.3..12.11.3...21.1.1.111.111.111.121.1......12...1.
rrnAC1983       QIQ:::::::::::A::::Q:::V::::S:::::RA::::::T:V::::::::GR:::L:
NP1754A         ::A:::::I:Q:::S:S::::::L::::::::T:::::E:V:TS::::::::::::::::
Hbo3627         ::::V:TM::D::G:::::E::::P:::S::YT:::V::V:::C::L:::::::::::L:
hla0312         E:::::TM::H::G:::D:H::::::A:::T:::::::E:::::::::::::::Y:::::

consensus       DFYENVRQFRLVDGADEVHKRVIARDAFEDVDSEELEPVTRFRE--
#oth            1.1.3..2..11.......2.2.1.1.12.132211.211113111
rrnAC1983       ::::L::T::I::::::::L:T:::E:::::::D:::::R:Y::::
NP1754A         ::::S::::::::::::::::::S:E::S::K::::::::::DG::
Hbo3627         ::::D::A:::I:::::::::::::::YR::EPSAI:GI:E:KG::
hla0312         R:H::::::::::::::::R:S::::::::PPA::::T::::G:FD