| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 3577 | NP4724A | hla1969 | NP1578A | VNG0846 | Hmu0956 | hla0943 |
| 1444 | NP4724A | 4016 | 755 | 940 | 763 | 880 | 701 |
| 2011 | hla1969 | 755 | 4563 | 1505 | 1271 | 1243 | 1198 |
| 2054 | NP1578A | 940 | 1505 | 3699 | 1340 | 1200 | 1145 |
| 2005 | VNG0846 | 763 | 1271 | 1340 | 3718 | 1282 | 1262 |
| 2043 | Hmu0956 | 880 | 1243 | 1200 | 1282 | 3755 | 1329 |
| 2014 | hla0943 | 701 | 1198 | 1145 | 1262 | 1329 | 3853 |
670 symbols consensus MSPRPRAR---------------------------------------------------- #oth 224345344423212222222222212222111111111111111111111111111111 NP4724A ::RF:SLLCRSV:::::::::::::::::::::::::::::::::::::::::::::::: hla1969 ::::S:T:PTSASSTSTQSAPASMAAVIRLLRASQSPTSPSAFTQTVRVIVGTSRRAGLK NP1578A :::P:T:E:::::::::::::::::::::::::::::::::::::::::::::::::::: VNG0846 --------:::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0956 V:V:LV::AG:::::::::::::::::::::::::::::::::::::::::::::::::: hla0943 VDE:RD:AVDASGSAADGAGSTIDDAEPSV:::::::::::::::::::::::::::::: consensus ---------------------------------------------ARARAALRRR----L #oth 111111111111111111111111111111111111111111112324233234111113 NP4724A :::::::::::::::::::::::::::::::::::::::::::::::G:EY:VDC::::A hla1969 TAKGSGVAGDDAEDDKALITEITSFDVHHRMTPLPQRLSKAGSRY:A::ES::E:ATPYF NP1578A :::::::::::::::::::::::::::::::::::::::::::::SDTSGW::H:::::: VNG0846 :::::::::::::::::::::::::::::::::::::::::::::M:F:::VAS:::::: Hmu0956 :::::::::::::::::::::::::::::::::::::::::::::SD::QWFE::::::F hla0943 ::::::::::::::::::::::::::::::::::::::::::::RG:LP::::::::::I consensus GIDTRALAAFRVALALLLLADLLL-RARNLSAFYTDAGVLPRSLLAADSPELARASIHAL #oth 11.3.1.111.121133123.1211.1233311...2.1112232225325324312132 NP4724A R::::S::V:::FVG::VV::VF::::::F:FY:::S::VTQA:AQ::TH:Y:-V:VYY: hla1969 :::P:::G:::I::::F::G:::FY:LPGV::::::D::::::T::EI::L:EAV::::I NP1578A :::A:::::::::V:::VI::::F::::GIP:::::::T:::GA:::EY:W::V::::TV VNG0846 :V:::S::::::G::VVV:V::A:::LQS:T:::::S:::::AVMR:QY:VVS:::L:M: Hmu0956 RV:::::::L::::GTI::L:V::::::H:A::::::::::T:T:RNVVGTP:LLT:::: hla0943 :::V:::::::I::GAV::V::A:::::::T:::::::::::::::ES::-:::F:LY:V consensus SGSAWLQAALFALAALAALALLVGYRTRLATAASLVLLASLQARNPFVLNGGDTLLRVLL #oth 113224234.1233232.12.21..11141132132123.1321..21112112214411 NP4724A TSDTT:I:::L::QVFI::::V::::::T:::LTFLFVI::DHH:::::SYA:::F:L:: hla1969 :::::V:TG:L:V::C::VG::::::::VS:GV::::::::Y::::Y:I:::N:I:A:F: NP1578A T:::VG:TV::L:SG:V::V:A:::H:::::::TAA:H:::H::::YL:::::A::V::: VNG0846 ::A::A::::::VT:V::V:::::::STA::F:TG::VV:MH::::L::::::LV:QM:F Hmu0956 :::V:::VC::FA:G:::::::I::::::::LL:::::L:::I::::::::::::::R:: hla0943 ::E::FVGL::LI::V::V::A::::::I:A:V:::::::::::::::::A:::::WQ:: consensus FWALFLPLGERWSVDAVR-----------------RDRTPRQRVVGLATAGLLAQLVAVY #oth 322222..11.111..332222211111111111333343343141321223.422.42. NP4724A :::P::::::::A::::H:::::::::::::::::AA:::::S:::A::FLA:::M:FM: hla1969 :LS:::::DA:::L::G:WSNSNGRDDVDGREAAE::GGADR::CS:G::VT:LT::SI: NP1578A AL:V::::::::::::L:::::::::::::::::::::Q:::Y:AS::::VV:::::V:: VNG0846 V:::G::::::::::::D:::::::::::::::::-RGAW:D:::SV::V:V:C:::II: Hmu0956 ::G::V:::::L::::TE::::::::::::::::AT:S::QTA:S::::V:::G:V:::: hla0943 GAG:LC:::A::::::::RRAALG::::::::::G:SLPESS:FT:PQS:L::TVV:::: consensus LSNAVVKLRGDAWMSGEAVPLVFGLEEFTVLLGPLLAEFPTLLAAVNWLWLALLVASPLL #oth 34.114.22111.42.3.24321412434241.4323241411234333.331.41121. NP4724A :L:GIH:TESE::Q::::T::I::ID:M:F:::EF:GA:::::TYGGL::FYM:LG:W:: hla1969 TA::IS:Y:S:T::::G:::QI:Q::::I:R:::FVS:HTVV::TI::::I:::S::V:: NP1578A :F:::F:YQSE:::R::::QYAL:::Q:A:W:::M::A:::V:V::::S:VL::T:A::: VNG0846 T::::L:::::::V::T::RT::S::M:V:G::HV:S:T:R::V:FDRV::V::AG:VC: Hmu0956 AV:::::::::::L::R:LA:::D:DHY:::A:D:::PV:L:P:LLG:S::::::::::: hla0943 V:::::::::E::PA::::GT::R:TYLHGP::G:MP:S:A:::::TYG::::::::::: consensus VALTGRLRAALAAAFVAAHLGMAATMRLGVFPLVAIAALLPFLPTFVWDRAEALLPRRQG #oth 2322.14.3231231122.21123.222.2.1413422.12231441.332323445353 NP4724A FF:R::::LP:V:L::GG::SF:L:V:I:A:AY::L:G:VF::Q:PF:RD:GR::R:LGI hla1969 I:T::W:::GI:L:::S:::::::::::::::FIM:TI::LCF::G::NLV::VTSKLH: NP1578A :V:::WR:V:VV:::A:::F::FV:::::L::A:VW:I::LY::ST::::I::I:GG::V VNG0846 IV:::WW:::A::V:AGM::::::::Q::::::::VVG:V::V:GC::EA:A:AR:Q:TV Hmu0956 :G::::A:G:::GL:::G:A::LV:VWV:L::::S:::::::F:A:::::VW:VV:D--- hla0943 ::AA::V:::::GIL:::::S::F:LQI::::V:SAT:::::C:P:::::I:S:AAPEI: consensus RSR-----PAERLPRS----------PAPTLPASV-----------RAAARRLAAVLLVL #oth 54322324432.1324111111111133323.4231222222222212554322332322 NP4724A DTAGVV:::RD::Y:F::::::::::-:D::::LRLLSGRYAVIRTG:YNAA:::::VA: hla1969 S::::::::T::AY::DGGSANESAS:I:S-:SR:::::::::::::RVIWTG::L:::G NP1578A V::::::TAV::::SL:::::::::::::--:KRL::::::::::::EGG::A:V:V::V VNG0846 HPVRWIADQR::A:SV:::::::::::V:S::R:::::::::::::::R::TAVTGVF:V Hmu0956 ---GWDRWS:S::DGH::::::::::AVG:I::::::::::::::::R:LGG:RRP::I: hla0943 :F:::::SM::::L::::::::::::LRS:R:G:TLVDLASKIVPD::TRE::V::IAA: consensus LLVALVAWTAAGVGVVDTPES---VAAGD----------------APEPSWDMFAPEPPS #oth 31244233433322322433322243431111111111111111143344.33.1.4.23 NP4724A A::CA:FLFN::AI:D:GY:QSRLNHEVEHTTGGEYVHTVAAGLGIRQ:E:SV:::H:RT hla1969 FFL:::W:Q:::::L::L:A::::ES::E::::::::::::::::LS:V::SF:::N::D NP1578A V::VT:V:PMGAA--:::E--:::TDRV:::::::::::::::::::DYA:TL:S:T::T VNG0846 :::GQA:Y:VVS::G:E::V:VGPLD:::::::::::::::::::::P:R:Y::::::L: Hmu0956 V:A:MLVSN::TL::AP----:::::DA:::::::::::::::::V::Q:::::::A::G hla0943 :::S:L::::M::::::A::PV::::VS:::::::::::::::::PA:SD:::::::::: consensus VDRWFVAPATTEDGERIDALAGAAFTWDRPPDAARQYPSTRWRKYLNRLRAADDDARRA- #oth 4242222321244.4331134251322221233333121211132444325323334312 NP4724A N::YY:FG:K:V::QER:VYNDR:::::::EPLQE:HDTY:E:FFM:SV:R:G:::ELPG hla1969 SSS:Y:VRG:L:S::S::VRG:Q:A:Y:::::::ET::T:L:HQFGF:M:Y:GESRY:P: NP1578A ET::::::T:F:T::TV::FD:S:V:::P:::::KT:A::L:HR:::EM:F:S:SE:QP: VNG0846 ::H:VK:::::PG:G::G:F::G::S:GK:::VSA::::A:::::VVNIADS:SR:V::G Hmu0956 ::G:::::G::TA:REV::::T:PLS:E::SKLE:A::::::::::L:::SG:TEP:::A hla0943 T:ALVL:T:::A::D:T:::H:DPVAT::T:SD::G::TA::::HFSL:S:D:T:RID:: consensus -LAAYLCQR-AAGTSGRELEAVTVFAVEQPVRL---NGS--EEAARERIGSADCR----- #oth 133222.4213344333421522234.33224311131322315522333343.423223 NP4724A RFGEHI:TV:YEEQY:I::THISM:E:TEDIT:ETITDTDSR:DD::HFYRH::D::::: hla1969 :V:::V:E::----:D:S::S::::H:::A:DP:::::PVG:PE:H:::-::A:-::::: NP1578A ::G:::::Q:::AE::EAVTQL::Y:::R::EA:::V:G::G::T:VELL:TE:NVDTAS VNG0846 ::V::::R:S::::PH:RVTN:::YD:R::T:::::G:::::PTH:R:::A:::PVNAAE Hmu0956 :::GF:::::WNR:HE:G::R:GLVF:AE:T:P:::::T::DPQR::AL:TYS::SATEK hla0943 :TL:H::D:::::F::A:T:::::S:::VD:--:::V::::::IWVREA:TRE::::::: consensus ---------- #oth 3322222211 NP4724A :::::::::: hla1969 :::::::::: NP1578A VAETRNLN:: VNG0846 RV:::::::: Hmu0956 GNSRVSPVPR hla0943 ::::::::::