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4 genomes BUD2168 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0381

rrnAC1750

- -

Hmu2172

-

hla1435

NP1774A

-

Pairwise sequence scores
Consensus score1977 Hmu2172 NP1774A hla1435 rrnAC0381 rrnAC1750
1284Hmu2172 2164 1105 1116 969 977
1441NP1774A 1105 2109 1121 1068 1137
1458hla1435 1116 1121 2017 1182 1279
1460rrnAC0381 969 1068 1182 1948 1367
1507rrnAC1750 977 1137 1279 1367 2020

312 symbols
consensus       ---------------------------MARDARLDRRAYLKAVGGAGAT--TGVAGC---
#oth            11111111111111111111111112224224431..4.1222.1232211323...212
Hmu2172         MPITAVGMIDHPEQARNVQQWLYRSIG:::TYSM:::::M:T::AL::::::AI::::::
NP1774A         ::::::::::::::::::::::::::::ES:PT::::S::S:::A::LA::A:A:::VGL
hla1435         :::::::::::::::::::::::::MSYRTETDIS::T:::LT:::S:VGL:::::::::
rrnAC0381       ::::::::::::::::::::::::::::P:E::V:::R::Q:I::TV::::LS:::::::
rrnAC1750       :::::::::::::::::::::::::::-MS:DG:S::Q::ST:::TAV:::VSL:::FGG

consensus       -DGNG---------------GDSTTTITAGTAPGFPPFEMKQDGELVGFDIDLLEAVIDR
#oth            24121111111111111111213222111..11......231....1...11.2.1.122
Hmu2172         :-SSS:::::::::::::::EEN:E::VP::NS::::::YTE:::::::::E:A:T::::
NP1774A         D::::DGNGDGNDDDSDDDSD:D:R::V:::::::::::FR:::::L::::::T::::E:
hla1435         :L:D:::::::::::::::::::::-::P:::::::::::QE:::::::::::::::V:E
rrnAC0381       :QSDS::::::::::::::::::Q:-L:::::::::::::::::::::::VE:::::VAA
rrnAC1750       GG::::::::::::::::::::GS:E:::::::::::::::::::::::::::::::::E

consensus       TDYELGGWEEFEFDSLIPAL-QNGNIDVIAAGMTINDERDEQIDFSDPYYESNQAILVRE
#oth            22.1221.2221.2....11131121.11..1...321.212.1.1.1.1112.112.11
Hmu2172         AG::V:E:QDIA:E::::SV:LD:D::L:::::::GPD:Q:::::T:::W::S::V::Q:
NP1774A         S:::F::::T:::::::::::::::::::::A:::E:::R:::A:::A:::AD:SV:::S
hla1435         :E::::E:AT::::::::::T::EE::::::A:::TED:Q:T:A:::::W::D:::::::
rrnAC0381       :E:::S::::L::K:::::::N:::V::V:::::::::::KA::::::::S:::::I:::
rrnAC1750       :::T:A:::::::K:::::::T:E::::V::::::::::::T:::T::::S:::::V:::

consensus       DGDFQPSSLEDLSGVAVGAQGGTTGENEVQDALIDDGLIAESDYNAYGNYVLAVEDLENG
#oth            21212.3131.111341...2....1432224.122.322.12214.11.1..12..2.1
Hmu2172         G:E:::E:V:::E::R::::::::::G:A-E::VE:::V::D:LRR:D::T::AQ:::::
NP1774A         :D:DL:Q:R:::::SI:::::::::::::-:R:::::I:P:::K:V:D::T::AT:::::
hla1435         G::::::AW::FE::S::::S::::ADQ::SN:V:P::V::D::RT::S::::::::::E
rrnAC0381       N:S:S::::::::EA:::::K:::::SVIK:Q::EA:T:P::Q::::::::::::::L:E
rrnAC1750       ::::S:A::S::::RPI:::K:::::TT:::E::SP:NLD::N::S:::::::::::Q::

consensus       NIDAVVIDEPVARTFAADRAVEIAFVIETGEQFGFGIRQGDDELASALNDGLATVRDDGT
#oth            .1.1111.2...41.22212132..331...21.1.313122114311.11.3212.11.
Hmu2172         :V:::IV:::::GS::G::::A:::::D::::::M:M:PD:ER:-:D:::A::EL:::::
NP1774A         ::::::V:V::::::SE:L:::V::E:::::EY::::::D:E::VA:V::::EA:T::::
hla1435         ::::::::L:::E::::N:D:::::IE:::::::::L:::ES:FQ:::::::::::::::
rrnAC0381       :V:VII::V:::NS:V:::PIKS:::H::::::::::QS:N::::G:::S::T::E::::
rrnAC1750       ::::::::::::Q::::Q:P:T:::TY::::N::::V:D::::FTQ::::::S::::GS:

consensus       YRDLTNEWFGQ-
#oth            .411132..113
Hmu2172         :DE:VG:::E-:
NP1774A         :N::VA:::E-:
hla1435         :SEI::T::::E
rrnAC0381       :::::EK::::K
rrnAC1750       :Q::::K::::Q