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[L] (-) COG3039 Transposase and inactivated derivatives, IS5 family
4 genomes BUD2184 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG5042

VNG5255

VNG6040

VNG6486

pNG5072

pNG7397

rrnAC1560

HVO_A0117

- - - - -

HQ2030A

Pairwise sequence scores
Consensus score2109 HVO_A0117 VNG5042 VNG5255 VNG6040 VNG6486 HQ2030A rrnAC1560 pNG5072 pNG7397
1897HVO_A0117 2123 1865 1865 1865 1865 1807 1771 1396 1806
2061VNG5042 1865 2110 2110 2110 2110 1911 1840 1446 1860
2061VNG5255 1865 2110 2110 2110 2110 1911 1840 1446 1860
2061VNG6040 1865 2110 2110 2110 2110 1911 1840 1446 1860
2061VNG6486 1865 2110 2110 2110 2110 1911 1840 1446 1860
1959HQ2030A 1807 1911 1911 1911 1911 2130 1946 1522 1951
1888rrnAC1560 1771 1840 1840 1840 1840 1946 2130 1557 1988
1494pNG5072 1396 1446 1446 1446 1446 1522 1557 1660 1599
1908pNG7397 1806 1860 1860 1860 1860 1951 1988 1599 2095

277 symbols
consensus       --MSKISRFTKKAVQLAKNAVGGRGEVAAPEGGGGFADYAIVSLHCLRVYLEKSYRETLD
#oth            111111111121212111121131111111111111121131111111211321113211
HVO_A0117       ::::::::::::::T::::V::D:::::::::::::::::L:::::::I::DE:::NA::
VNG5042         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5255         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6040         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6486         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HQ2030A         ::::::::::::::::::::::D:::::::::::::::::V:::::::::::::::::::
rrnAC1560       MS::::::::S:V:::::::::E::::::::::::::E::V::::::::::K:::::A::
pNG5072         ::----------------------------------------------------------
pNG7397         ::::::::::::::::::::::E::::::::::::::E::V:::::::::::::::VA::

consensus       LLSEMPHILAEIGLNEADLPDHSTLVKAFDRIKTALWRVLLRLSAQLHDPSGHAAIDATF
#oth            1121..1..1...1331...1......1...21112..........1.2.....1.....
HVO_A0117       ::::::::::::::E:G::::::::::::::FQMKV::::::::::::::::::::::::
VNG5042         :::::::::::::::::::::::::::::::L::::::::::::::::::::::::::::
VNG5255         :::::::::::::::::::::::::::::::L::::::::::::::::::::::::::::
VNG6040         :::::::::::::::::::::::::::::::L::::::::::::::::::::::::::::
VNG6486         :::::::::::::::::::::::::::::::L::::::::::::::::::::::::::::
HQ2030A         :::::::::G::::EP::::H::::::W::::::::::::::::::::::::::V:::::
rrnAC1560       ::N:::Q::G:::RVK:::::::::::W::::::::::::::::::::G:::::::::::
pNG5072         ----::Q::G:::::A:::::::::::W:::::::I::::::::::E:E:::::::::::
pNG7397         ::::::Q::G::::DA:::::::::::W::::::::::::::::::E:E:::::::::::

consensus       FDRENASKHYCRRTNYRVQTLKTTALVDTETQAILDVHCTTEKRHDTQLGWQVARRNAGD
#oth            ....1..1........1.....1.1....111.1.....1.1.2..........1.....
HVO_A0117       ::::::::::::::::H:::::A::::::Q:::V:::::::::T::::::::::C:::::
VNG5042         ::::T::::::::::::::::::::::::::::::::::S:G:P::::::::::::::::
VNG5255         ::::T::::::::::::::::::::::::::::::::::S:G:P::::::::::::::::
VNG6040         ::::T::::::::::::::::::::::::::::::::::S:G:P::::::::::::::::
VNG6486         ::::T::::::::::::::::::::::::::::::::::S:G:P::::::::::::::::
HQ2030A         ::::::::::::::::::::::::T:::::S:::::::::::::::::::::::::::::
rrnAC1560       ::::::::::::::::::::::A:::::::SR::::::::::::::::::::::::::::
pNG5072         :::::::N::::::::::::::A:::::::S:::::::::::::::::::::::::::::
pNG7397         ::::::::::::::::::::::A:::::::S:::::::::::::::::::::::::::::

consensus       LASLAADKGYDWMELRKKLREDGVRPLIKHRIFRPIDHAHNARVDGPRYRQRAMCETVFS
#oth            .2...........2..1....2.........1...........1...1....1.......
HVO_A0117       :H:::::::::::Q::E::::E::::::::::::::::::::::::::::::S:::::::
VNG5042         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5255         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6040         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6486         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HQ2030A         :T::::::::::::::E::::::::::::::E:::::::::::I:::Q::::::::::::
rrnAC1560       :::::::::::::D::E::::E:::::::::E:::::::::::I::::::::::::::::
pNG5072         :::::::::::::::::::::K:::::::::E:::::::::::I::::::::::::::::
pNG7397         :::::::::::::D::E::::E:::::::::E:::::::::::I::::::::::::::::

consensus       TIKRTLGDAVRARAWYREFRELVLKCVVHNIKRAVTP
#oth            11...1.......2.11....1..1.2.....22222
HVO_A0117       S::::H:::::::T::::::::::::::::::::A:-
VNG5042         :::::::::::::::F:::::I:::::::::::::::
VNG5255         :::::::::::::::F:::::I:::::::::::::::
VNG6040         :::::::::::::::F:::::I:::::::::::::::
VNG6486         :::::::::::::::F:::::I:::::::::::::::
HQ2030A         :::::::::::::S::G:::::::M:A:::::Q::K:
rrnAC1560       :::::::::::::T::G:::::::M:T:::::QSLK:
pNG5072         :V:::::::::::T::G:::::::M:::::::QSLKQ
pNG7397         :::::::::::::T::G:::::::M:::::::ETL--