|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2109 | HVO_A0117 | VNG5042 | VNG5255 | VNG6040 | VNG6486 | HQ2030A | rrnAC1560 | pNG5072 | pNG7397 |
1897 | HVO_A0117 | 2123 | 1865 | 1865 | 1865 | 1865 | 1807 | 1771 | 1396 | 1806 |
2061 | VNG5042 | 1865 | 2110 | 2110 | 2110 | 2110 | 1911 | 1840 | 1446 | 1860 |
2061 | VNG5255 | 1865 | 2110 | 2110 | 2110 | 2110 | 1911 | 1840 | 1446 | 1860 |
2061 | VNG6040 | 1865 | 2110 | 2110 | 2110 | 2110 | 1911 | 1840 | 1446 | 1860 |
2061 | VNG6486 | 1865 | 2110 | 2110 | 2110 | 2110 | 1911 | 1840 | 1446 | 1860 |
1959 | HQ2030A | 1807 | 1911 | 1911 | 1911 | 1911 | 2130 | 1946 | 1522 | 1951 |
1888 | rrnAC1560 | 1771 | 1840 | 1840 | 1840 | 1840 | 1946 | 2130 | 1557 | 1988 |
1494 | pNG5072 | 1396 | 1446 | 1446 | 1446 | 1446 | 1522 | 1557 | 1660 | 1599 |
1908 | pNG7397 | 1806 | 1860 | 1860 | 1860 | 1860 | 1951 | 1988 | 1599 | 2095 |
277 symbols consensus --MSKISRFTKKAVQLAKNAVGGRGEVAAPEGGGGFADYAIVSLHCLRVYLEKSYRETLD #oth 111111111121212111121131111111111111121131111111211321113211 HVO_A0117 ::::::::::::::T::::V::D:::::::::::::::::L:::::::I::DE:::NA:: VNG5042 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG5255 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG6040 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG6486 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2030A ::::::::::::::::::::::D:::::::::::::::::V::::::::::::::::::: rrnAC1560 MS::::::::S:V:::::::::E::::::::::::::E::V::::::::::K:::::A:: pNG5072 ::---------------------------------------------------------- pNG7397 ::::::::::::::::::::::E::::::::::::::E::V:::::::::::::::VA:: consensus LLSEMPHILAEIGLNEADLPDHSTLVKAFDRIKTALWRVLLRLSAQLHDPSGHAAIDATF #oth 1121..1..1...1331...1......1...21112..........1.2.....1..... HVO_A0117 ::::::::::::::E:G::::::::::::::FQMKV:::::::::::::::::::::::: VNG5042 :::::::::::::::::::::::::::::::L:::::::::::::::::::::::::::: VNG5255 :::::::::::::::::::::::::::::::L:::::::::::::::::::::::::::: VNG6040 :::::::::::::::::::::::::::::::L:::::::::::::::::::::::::::: VNG6486 :::::::::::::::::::::::::::::::L:::::::::::::::::::::::::::: HQ2030A :::::::::G::::EP::::H::::::W::::::::::::::::::::::::::V::::: rrnAC1560 ::N:::Q::G:::RVK:::::::::::W::::::::::::::::::::G::::::::::: pNG5072 ----::Q::G:::::A:::::::::::W:::::::I::::::::::E:E::::::::::: pNG7397 ::::::Q::G::::DA:::::::::::W::::::::::::::::::E:E::::::::::: consensus FDRENASKHYCRRTNYRVQTLKTTALVDTETQAILDVHCTTEKRHDTQLGWQVARRNAGD #oth ....1..1........1.....1.1....111.1.....1.1.2..........1..... HVO_A0117 ::::::::::::::::H:::::A::::::Q:::V:::::::::T::::::::::C::::: VNG5042 ::::T::::::::::::::::::::::::::::::::::S:G:P:::::::::::::::: VNG5255 ::::T::::::::::::::::::::::::::::::::::S:G:P:::::::::::::::: VNG6040 ::::T::::::::::::::::::::::::::::::::::S:G:P:::::::::::::::: VNG6486 ::::T::::::::::::::::::::::::::::::::::S:G:P:::::::::::::::: HQ2030A ::::::::::::::::::::::::T:::::S::::::::::::::::::::::::::::: rrnAC1560 ::::::::::::::::::::::A:::::::SR:::::::::::::::::::::::::::: pNG5072 :::::::N::::::::::::::A:::::::S::::::::::::::::::::::::::::: pNG7397 ::::::::::::::::::::::A:::::::S::::::::::::::::::::::::::::: consensus LASLAADKGYDWMELRKKLREDGVRPLIKHRIFRPIDHAHNARVDGPRYRQRAMCETVFS #oth .2...........2..1....2.........1...........1...1....1....... HVO_A0117 :H:::::::::::Q::E::::E::::::::::::::::::::::::::::::S::::::: VNG5042 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG5255 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG6040 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG6486 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2030A :T::::::::::::::E::::::::::::::E:::::::::::I:::Q:::::::::::: rrnAC1560 :::::::::::::D::E::::E:::::::::E:::::::::::I:::::::::::::::: pNG5072 :::::::::::::::::::::K:::::::::E:::::::::::I:::::::::::::::: pNG7397 :::::::::::::D::E::::E:::::::::E:::::::::::I:::::::::::::::: consensus TIKRTLGDAVRARAWYREFRELVLKCVVHNIKRAVTP #oth 11...1.......2.11....1..1.2.....22222 HVO_A0117 S::::H:::::::T::::::::::::::::::::A:- VNG5042 :::::::::::::::F:::::I::::::::::::::: VNG5255 :::::::::::::::F:::::I::::::::::::::: VNG6040 :::::::::::::::F:::::I::::::::::::::: VNG6486 :::::::::::::::F:::::I::::::::::::::: HQ2030A :::::::::::::S::G:::::::M:A:::::Q::K: rrnAC1560 :::::::::::::T::G:::::::M:T:::::QSLK: pNG5072 :V:::::::::::T::G:::::::M:::::::QSLKQ pNG7397 :::::::::::::T::G:::::::M:::::::ETL--