Home |  Text search
4 genomes BUD2195 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

pNG7319

HVO_B0236

Hbo0921

- - - -

HQ1128A

Pairwise sequence scores
Consensus score3844 HQ1128A Hbo0921 pNG7319 HVO_B0236
1937HQ1128A 3783 1402 1420 1373
2395Hbo0921 1402 3875 1734 1741
2788pNG7319 1420 1734 3820 2337
2647HVO_B0236 1373 1741 2337 3596

519 symbols
consensus       MTRETEADG--LARRVAGDDARDNGDAVLDAARETADSAPVARTGPTGADAAEPLLLATR
#oth            113323232223332232333332333111..12222231.321.1..13122..111.3
HQ1128A         ::IL:PT:::::QL::::V::L::TEID::::I:S----:::TV:S:::I::::::M::T
Hbo0921         ::TSN::V:GPVV:VAG:SPH:TDVS::V:::::ATET:T:RE::::::::L:::::V:V
pNG7319         :::::T:LAHST:V::ST:GRSQ:::R::S:::T::::T::V::::::IT::T::VMV::
HVO_B0236       ---------::----------------::S:::R::::VT:L::::::ISEYD::V:::D

consensus       AGRTAFYPTPSLARVRDLIHAA-EAG---DAPTADAAAVVDHDPERAELPVPDRGPLAVG
#oth            222...12221331112122231.3.11123221111...11.211331.213311.311
HQ1128A         D:T:::::AC:ST:LETVA:RID:T:::::ITV::P:::::::::TP:M:TTGLST:QDE
Hbo0921         :NK::::A::::DT::NV::::::S:KSA::LADG:D:::ES:GT:--:::::E:::R::
pNG7319         SE:::::SD::P:T:::::DEL:::::::TV:::::D:::E::::T:S::A:E::::S::
HVO_B0236       ::::::F::AETS:::::VT:M::D::::EL::DG::::::::A::TT::::TD::::::

consensus       RRRVLGPCGWVAPLNPADYS-----FDDIDRDADAAAGAGLLGRGRGDAAADRPVADTWA
#oth            3.1..121..23.23132222222223132221333122112...11..21.3.1122.3
HQ1128A         S::::SGS::RR:A:VD::DAAGGFLK:::P::VFD::ESIH:::W:::CH:S:LTK::M
Hbo0921         C:::::R::::N:TE:PTE:VLDAVS::SESVCTEIHRI::::::::::R::::::EG::
pNG7319         ::N:::::::::::S:::W:::::::VSTQ:T::V:::::::::::::::::E::::::E
HVO_B0236       T:::::::::LD::D:TA:Q::::::HSL::::S:V:D:::V::::C:::::D::::A:R

consensus       TARETDGDPVVVVNANDADDRNRGDSTLLSGAPMAVLDGAAAVAEYVDAEDAVIYAAETD
#oth            2.2211.1212.2..111222222.21.121312311.12211.2212131212213222
HQ1128A         D:DDAE:EAAI:I::HS----:P:::L:::SV:FTI::::VSL:QT:::SEI::F:SIA:
Hbo0921         :::K::::T:L::::::::E:::T::::VE:DAGG:V:A:M:::HL:E:::VIM::-Q:G
pNG7319         ::S:::::::::C:::::S:LPT::D:::::::::::::I:::::::::G:::V:VN:SQ
HVO_B0236       R::::::::::::::::::::Q:A:R:::A:S::S::::V::::::LGTTE:::HV::::

consensus       TDAQARLREAIDAAADELPVAPQLVTGPDEYRAGEPTAALEAIEGNDRLEARLRPPGPAE
#oth            233213112.1111211222112112..2111.1...1...11..21.2.1..1..2.13
HQ1128A         ESTIETA:T:::RYPN:SSI:ID:::::A::::A:::M::::::::H:::::::::::ES
Hbo0921         SM:AE::SA:ASRYR::YGD:::VAV::ER:I:::::M:::SL:::::::::::::::ET
pNG7319         ::V::D::::::::::T:::V::::A::::F:::::::::::L::A::I:P::Q::S::K
HVO_B0236       :EL::H::::::::::::::V:VV:::::::::::::::::::::V::T:P::Q::T:::

consensus       RGLYGRPTVIHTPRTLAQVRQALADPEEFDADAADPGTRIVTVTGDVADPATIELRSDAR
#oth            3.......11..1..11212312221233.2111212..22212...222111.132313
HQ1128A         V:::::::L:::A::::HLAVS:RE----:SIDSH:S:::MSIE:::T:RTI::VPETTT
Hbo0921         H:::::::::::::::L:::E:ILR:::::::D::::::V:::::::DS:::V::TTG:P
pNG7319         :::::::::V:::::F:::Q::V:::GSV::::::::::::A:A:::::S::V::::S:S
HVO_B0236       Y::::::::::::::F:R::L::::::GT:R:::-ST::LL:::::::A:::::VG::::

consensus       LAAARAAVDRTGSFKMACVGGVFGGLTRDLDHALTAAALRAANLGTEGVVELLNDDRCAV
#oth            .31122.1132222.1.1...21..1113..3332133.32.1...1.1.111322..21
HQ1128A         :ETVC::A:T:DGI:A:::::R::::AA:::ISVDPET:ID:::::::I:HV:SE:::V:
Hbo0921         :R::A::::::ET-:::I:::Q:::V::H:::T:S:P::SG:::::::::::FG:::::L
pNG7319         :::V:K::EMD:::::::::::L::V::S::M:P::QS::::G:::N:::::FDTG::T:
HVO_B0236       :ST::N::ELE:::::::::::::::::T::VES:::E:T::G::::::::::::E::::

consensus       ATVGERARFASEENCGRCVPCREGTTQLAELLRDIYDGSFDRDKIRELGRVMRRSSNCDF
#oth            111.2..1..111.1.....1....2..11...22.2.21232211..3.1.231.2.32
HQ1128A         EF:::::Q::A::::::::::::::::::::::SL:::TYQPEA:D::I:::TTT:I:E:
Hbo0921         ::::S:::::::::::::::::::::::TD::::::A:DY:D:TL:::T:T::NT:T:::
pNG7319         E:::K::::::M::S:::::G::::K::::::::::::::EN::::::S::::Q::::QT
HVO_B0236       ::A:::::::::A:S:::::G::::V::T::::AV:R:::::A:::::::::S:::::LL

consensus       GAHAPRPVQTAMDAFESEFEAHADGRCPSGTCDAKL--Q
#oth            .22.2.113..221..21.1..12.1..1.2.3222121
HQ1128A         :VN:G::T:::LN::::::::::N::::T:S:L:TMEA:
Hbo0921         :RS:A:T:E:::A:::A:::::TH::::T:Q:::QA:G:
pNG7319         ::::::::T::I:E::P::R::T::H::::::TE::::-
HVO_B0236       ::::::::L::::E:::S::::::::::::::SD::::-